Isopentenyl diphosphate isomerase: A checkpoint to isoprenoid biosynthesis

被引:126
|
作者
Berthelot, Karine [1 ]
Estevez, Yannick [1 ]
Deffieux, Alain [1 ]
Peruch, Frederic [1 ]
机构
[1] ENSCBP, IPB, UMR 5629, Lab Chim Polymeres Organ,CNRS, F-33607 Pessac, France
关键词
Isopentenyl diphosphate isomerase; IPP; DMAPP; Isoprenoid synthesis; Terpens; PYROPHOSPHATE ISOMERASE; ESCHERICHIA-COLI; CRYSTAL-STRUCTURE; FUNCTIONAL-ANALYSIS; MEVALONATE PATHWAY; CAROTENOID BIOSYNTHESIS; THERMUS-THERMOPHILUS; PARTIAL-PURIFICATION; CATALYTIC MECHANISM; BACILLUS-SUBTILIS;
D O I
10.1016/j.biochi.2012.03.021
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Even if the isopentenyl diphosphate (IPP) isomerases have been discovered in the 50s, it is only in the last decade that the genetical, enzymatical, structural richness and cellular importance of this large family of crucial enzymes has been uncovered. Present in all living kingdoms, they can be classified in two subfamilies: type 1 and type 2 IPP isomerases, which show clearly distinct characteristics. They all perform the regulatory isomerization of isopentenyl diphosphate into dimethylallyl diphosphate, a key rate-limiting step of the terpenoid biosynthesis, via a protonation/deprotonation mechanism. Due to their importance in the isoprenoid metabolism and the increasing interest of industry devoted to terpenoid production, it is foreseen that the biotechnological development of such enzymes should be under intense scrutiny in the near future. (C) 2012 Elsevier Masson SAS. All rights reserved.
引用
收藏
页码:1621 / 1634
页数:14
相关论文
共 50 条
  • [31] Isopentenyl Diphosphate Isomerase (IPI) Gene Silencing Negatively Affects Patchouli Alcohol Biosynthesis in Pogostemon cablin
    Yan, Wuping
    Yang, Yuzhang
    Wu, Yougen
    Yu, Jing
    Zhang, Junfeng
    Yang, Dongmei
    Muhammad, Zeeshan Ul Haq
    PLANT MOLECULAR BIOLOGY REPORTER, 2021, 39 (03) : 557 - 565
  • [32] Isopentenyl Diphosphate Isomerase (IPI) Gene Silencing Negatively Affects Patchouli Alcohol Biosynthesis in Pogostemon cablin
    Wuping Yan
    Yuzhang Yang
    Yougen Wu
    Jing Yu
    Junfeng Zhang
    Dongmei Yang
    Zeeshan Ul Haq Muhammad
    Plant Molecular Biology Reporter, 2021, 39 : 557 - 565
  • [33] Isopentenyl-diphosphate isomerase is essential for viability of Caenorhabditis elegans
    John Yochem
    David H. Hall
    Leslie R. Bell
    Edward M. Hedgecock
    Robert K. Herman
    Molecular Genetics and Genomics, 2005, 273 : 158 - 166
  • [34] Studies on the nonmevalonate pathway for isopentenyl diphosphate biosynthesis
    Kuzuyama, T
    NIPPON NOGEIKAGAKU KAISHI-JOURNAL OF THE JAPAN SOCIETY FOR BIOSCIENCE BIOTECHNOLOGY AND AGROCHEMISTRY, 2001, 75 (10): : 1053 - 1059
  • [35] Preliminary structural studies of Escherichia coli isopentenyl diphosphate isomerase
    Oudjama, Y
    Durbecq, V
    Sainz, G
    Clantin, B
    Tricot, C
    Stalon, V
    Villeret, V
    Droogmans, L
    ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY, 2001, 57 : 287 - 288
  • [36] Genetic evidence of branching in the isoprenoid pathway for the production of isopentenyl diphosphate and dimethylallyl diphosphate in Escherichia coli
    Rodríguez-Concepción, M
    Campos, N
    Lois, LM
    Maldonado, C
    Hoeffler, JF
    Grosdemange-Billiard, C
    Rohmer, M
    Boronat, A
    FEBS LETTERS, 2000, 473 (03) : 328 - 332
  • [37] Isopentenyl diphosphate isomerase and prenyltransferase activities in rubiaceous and apocynaceous cultures
    Ramos-Valdivia, AC
    van der Heijden, R
    Verpoorte, R
    PHYTOCHEMISTRY, 1998, 48 (06) : 961 - 969
  • [38] Isopentenyl-diphosphate isomerase is essential for viability of Caenorhabditis elegans
    Yochem, J
    Hall, DH
    Bell, LR
    Hedgecock, EM
    Herman, RK
    MOLECULAR GENETICS AND GENOMICS, 2005, 273 (02) : 158 - 166
  • [39] Construction of monomeric type 2 isopentenyl diphosphate: dimethylallyl diphosphate isomerase with catalytic activity
    Neti, Syam Sundar
    Poulter, C. Dale
    ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY, 2014, 248
  • [40] Monoclinic form of isopentenyl diphosphate isomerase: a case of polymorphism in biomolecular crystals
    de Ruyck, Jerome
    Oudjama, Yamina
    Wouters, Johan
    ACTA CRYSTALLOGRAPHICA SECTION F-STRUCTURAL BIOLOGY COMMUNICATIONS, 2008, 64 : 239 - 242