Use of a rhodamine-based bifunctional probe in N-terminal specific labeling of Thermomyces lanuginosus xylanase

被引:11
|
作者
Jia, Jia [1 ]
Chen, Wei [1 ]
Ma, Huimin [1 ]
Wang, Ke [2 ]
Zhao, Chuan [2 ]
机构
[1] Chinese Acad Sci, Inst Chem, Beijing Natl Lab Mol Sci, Key Lab Analyt Chem Living Biosyst, Beijing 100190, Peoples R China
[2] Shijiazhuang Ctr Dis Control & Prevent, Shijiazhuang 050011, Peoples R China
关键词
SELECTIVE PROTEIN MODIFICATION; BETA-LACTOGLOBULIN; FLUORESCENT-PROBE; LOCAL POLARITY; ANGSTROM RESOLUTION; CHARGE MODIFICATION; FAMILY-11; XYLANASE; THERMAL-STABILITY; DISULFIDE BRIDGE; STRUCTURAL BASIS;
D O I
10.1039/c005223j
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Rhodamine B piperazinoacetohydrazine (RBPH) is used as a bifunctional probe for the N-terminal specific modification of a thermophilic enzyme (T. lanuginosus xylanase), and the modification effect on the thermostability of the enzyme is investigated. The probe RBPH, bearing a spectroscopic unit of rhodamine B, a carbonyl-specific labeling unit of hydrazine and a linker of piperazine, not only has a stable always-on spectroscopic response, but also exists in a cationic form. These properties enable RBPH to serve as a bifunctional probe (simultaneous introduction of stable spectroscopic signal and positive charge) for the protein modification, and such an application has been successfully demonstrated on the N-terminal labeling of T. lanuginosus xylanase. A temperature-dependent inactivation study shows that the modification of T. lanuginosus xylanase by RBPH hardly changes its thermostability, in other words, a small change in electric charge of the N-terminal region caused by introducing one positive charge is not enough to alter the thermostability of the enzyme. This reveals a conservative property of the N-terminal domain for electric charge change, and such a property may result from the fact that the N-terminal domain of the enzyme already has 4 charged residues, which can produce strong electrostatic interactions, thereby making the domain quite stable.
引用
收藏
页码:1829 / 1833
页数:5
相关论文
共 48 条
  • [21] Letter:: Specific isotope labeling for the identification of free N-terminal peptides of proteins separated by polyacrylamide gel electrophoresis
    Sanchez, Aniel
    Ramos, Yassel
    Solano, Yanni
    Gonzalez, Luis Javier
    Betancourt, Lazaro
    Gil, Jeovanis
    Padron, Gabriel
    Besada, Vladimir
    EUROPEAN JOURNAL OF MASS SPECTROMETRY, 2007, 13 (04) : 307 - 309
  • [22] N-terminal specific fluorescence labeling of proteins through incorporation of fluorescent hydroxy acid and subsequent ester cleavage
    Watanabe, Takayoshi
    Miyata, Yoichi
    Abe, Ryoji
    Muranaka, Norihito
    Hohsaka, Takahiro
    CHEMBIOCHEM, 2008, 9 (08) : 1235 - 1242
  • [23] N-Terminal sequencing by mass spectrometry through specific fluorescamine labeling of α-amino groups before tryptic digestion
    Dhaunta, Neeraj
    Fatima, Uzma
    Guptasarma, Purnananda
    ANALYTICAL BIOCHEMISTRY, 2011, 408 (02) : 263 - 268
  • [24] Structural transitions in full-length human prion protein detected by xenon as probe and spin labeling of the N-terminal domain
    Sunilkumar Puthenpurackal Narayanan
    Divya Gopalakrishnan Nair
    Daniel Schaal
    Marisa Barbosa de Aguiar
    Sabine Wenzel
    Werner Kremer
    Stephan Schwarzinger
    Hans Robert Kalbitzer
    Scientific Reports, 6
  • [25] Structural transitions in full-length human prion protein detected by xenon as probe and spin labeling of the N-terminal domain
    Narayanan, Sunilkumar Puthenpurackal
    Nair, Divya Gopalakrishnan
    Schaal, Daniel
    de Aguiar, Marisa Barbosa
    Wenzel, Sabine
    Kremer, Werner
    Schwarzinger, Stephan
    Kalbitzer, Hans Robert
    SCIENTIFIC REPORTS, 2016, 6
  • [26] Site-Specific Labeling of Protein Lysine Residues and N-Terminal Amino Groups with Indoles and Indole-Derivatives
    Larda, Sacha Thierry
    Pichugin, Dmitry
    Prosser, Robert Scott
    BIOCONJUGATE CHEMISTRY, 2015, 26 (12) : 2376 - 2383
  • [27] Site-Specific Modification of Proteins through N-Terminal Azide Labeling and a Chelation-Assisted CuAAC Reaction
    Inoue, Nozomu
    Onoda, Akira
    Hayashi, Takashi
    BIOCONJUGATE CHEMISTRY, 2019, 30 (09) : 2427 - 2434
  • [28] The N-terminal cellulose-binding domain of EGXA increases thermal stability of xylanase and changes its specific activities on different substrates
    Ding, Ming
    Teng, Yigang
    Yin, Qiuyu
    Zhao, Jie
    Zhao, Fukun
    ACTA BIOCHIMICA ET BIOPHYSICA SINICA, 2008, 40 (11) : 949 - 954
  • [29] N-Terminal peptide labeling strategy for incorporation of isotopic tags: a method for the determination of site-specific absolute phosphorylation stoichiometry
    Zhang, XL
    Jin, QK
    Carr, SA
    Annan, RS
    RAPID COMMUNICATIONS IN MASS SPECTROMETRY, 2002, 16 (24) : 2325 - 2332
  • [30] Reinvestigation of an O-Salicylaldehyde Ester Functional Group in Aqueous Buffer and Discovery of a Coumarin Scaffold Probe for Selective N-Terminal Cysteine Labeling
    Murale, Dhiraj P.
    Hong, Seong Cheol
    Jang, Se-young
    Lee, Jun-Seok
    CHEMBIOCHEM, 2018, 19 (24) : 2545 - 2549