Genetic Structure ofAmphioctopus ovulum(Mollusca: Cephalopoda: Octopodidae) as Revealed by Mitochondrial and Nuclear DNA

被引:1
|
作者
Muhammad, Faiz [1 ,2 ]
Dou, Canfeng [1 ]
Liu, Liqin [1 ]
Li, Gong [1 ]
Lashari, Punhal [1 ,3 ]
Lu, Zhen-ming [1 ]
机构
[1] Zhejiang Ocean Univ, Coll Marine Sci & Technol, Natl Engn Res Ctr Marine Facil Aquaculture, Zhoushan, Peoples R China
[2] Univ Karachi, Ctr Excellence Marine Biol, Karachi, Pakistan
[3] Univ Sindh, Dept Fresh Water Biol & Fisheries, Jamshoro, Pakistan
来源
THALASSAS | 2020年 / 36卷 / 02期
基金
中国国家自然科学基金;
关键词
Amphioctopus ovulum; Absence of genetic structure; mtDNA and Nuclear genes; China coast; OCTOPUS-VULGARIS CEPHALOPODA; POPULATION-GENETICS; MEDITERRANEAN SEA; MINOR SASAKI; PHYLOGENY; DIVERSITY; EVOLUTION; SOFTWARE; MOLLUSCA; FLOW;
D O I
10.1007/s41208-020-00231-x
中图分类号
Q17 [水生生物学];
学科分类号
071004 ;
摘要
Amphioctopus ovulumis an important species found along the China coast distributed from the East China Sea to the South China Sea. This is the first study about the population structure and diversity carried out for this species in the China Sea. Two mitochondrial DNA genes Cytochrome oxidase subunit 1 and Cytochrome b (CO1 & Cytb) and one nuclear DNA gene (Heat shock protein 70 (HSP-70) were used to assess the genetic structure among four populations spanning the eastern to southern regions of the Chinese coast. Fragments of 568, 831, and 836 bp in length, representing three genes (CO1, Cytb, and HSP-70) were amplified from 105,106 and 106 individuals, respectively. Overall, CO1 ("Hd" 0.579; "n" 0.00152), Cytb ("Hd" 0.610; "n" 0.00130) and HSP-70 ("Hd" 0.925; "n" 0.00652) showed high haplotype diversity and low nucleotide diversity. All three genes revealed lower molecular variance among populations and higher variance within populations. Relatively lower F(ST)values were obtained for CO1 ( F-ST=0.00357 to 0.1641), Cytb (F-ST=0.00522 to 0.01959), HSP-70 (F-ST=0.00498 to 0.08504) which indicated low genetic variation among populations. The phylogenetic analysis does not separate four populations. The network analysis revealed the occurrence of the main haplotype (H1 (mtDNA)) and (H2 HSP-70) shared by all populations and many secondary haplotypes originated from the principal for all the three markers. These results will enhance our understanding ofA.ovulumto allow better exploitation, protection, and management of this species.
引用
收藏
页码:463 / 469
页数:7
相关论文
共 50 条
  • [41] Morphological description and mitochondrial DNA-based phylogenetic placement of a new species of Callistoctopus Taki, 1964 (Cephalopoda, Octopodidae) from the southeast waters of China
    Zheng, Xiaodong
    Xu, Chenxi
    Li, Jiahua
    ZOOKEYS, 2022, (1121) : 1 - 15
  • [42] Phylogenetic relationships among cirrate octopods (Mollusca: Cephalopoda) resolved using mitochondrial 16S ribosomal DNA sequences
    Piertney, SB
    Hudelot, C
    Hochberg, FG
    Collins, MA
    MOLECULAR PHYLOGENETICS AND EVOLUTION, 2003, 27 (02) : 348 - 353
  • [43] Genetic diversity and structure of the noble crayfish populations in the Balkan Peninsula revealed by mitochondrial and microsatellite DNA markers
    Gross, Riho
    Lovrencic, Leona
    Jelic, Misel
    Grandjean, Frederic
    Duretanovic, Simona
    Simic, Vladica
    Burimski, Oksana
    Bonassin, Lena
    Groza, Marius-Ioan
    Maguire, Ivana
    PEERJ, 2021, 9
  • [44] Genetic structure and diversity of Japanese kokanee Oncorhynchus nerka stocks as revealed by microsatellite and mitochondrial DNA markers
    Yamamoto, S.
    Kitamura, S.
    Sakano, H.
    Morita, K.
    JOURNAL OF FISH BIOLOGY, 2011, 79 (05) : 1340 - 1349
  • [45] Subtle population genetic structure in the Hawaiian grouper, Epinephelus quernus (Serranidae) as revealed by mitochondrial DNA analyses
    Rivera, MAJ
    Kelley, CD
    Roderick, GK
    BIOLOGICAL JOURNAL OF THE LINNEAN SOCIETY, 2004, 81 (03) : 449 - 468
  • [46] Differentiation under isolation and genetic structure of Sardinian hares as revealed by craniometric analysis, mitochondrial DNA and microsatellites
    Canu, Antonio
    Suchentrunk, Franz
    Cossu, Antonio
    Foddai, Rosolino
    Iacolina, Laura
    Ben Slimen, Hichem
    Apollonio, Marco
    Scandura, Massimo
    JOURNAL OF ZOOLOGICAL SYSTEMATICS AND EVOLUTIONARY RESEARCH, 2012, 50 (04) : 328 - 337
  • [47] Genetic Alterations in Mitochondrial DNA Are Complementary to Nuclear DNA Mutations in Pheochromocytomas
    Tabebi, Mouna
    Lysiak, Malgorzata
    Dutta, Ravi Kumar
    Lomazzi, Sandra
    Turkina, Maria V.
    Brunaud, Laurent
    Gimm, Oliver
    Soederkvist, Peter
    CANCERS, 2022, 14 (02)
  • [48] Genetic diversity and structure of the West Balkan Pramenka sheep types as revealed by microsatellite and mitochondrial DNA analysis
    Cinkulov, M.
    Popovski, Z.
    Porcu, K.
    Tanaskovska, B.
    Hodzic, A.
    Bytyqi, H.
    Mehmeti, H.
    Margeta, V.
    Djedovic, R.
    Hoda, A.
    Trailovic, R.
    Brka, M.
    Markovic, B.
    Vazic, B.
    Vegara, M.
    Olsaker, I.
    Kantanen, J.
    JOURNAL OF ANIMAL BREEDING AND GENETICS, 2008, 125 (06) : 417 - 426
  • [49] ANALYSIS OF GENETIC STRUCTURE OF HUCHEN (Hucho hucho) IN SERBIA INFERRED FROM MITOCHONDRIAL AND NUCLEAR DNA
    Maric, Sasa
    Razpet, Andrej
    Nikolic, Vera
    Snoj, Ales
    Simonovic, Predrag
    ACTA VETERINARIA-BEOGRAD, 2014, 64 (02): : 236 - 244
  • [50] Genetic structure of the Peruvian scallop Argopecten purpuratus inferred from mitochondrial and nuclear DNA variation
    Marin, Alan
    Fujimoto, Takafumi
    Arai, Katsutoshi
    MARINE GENOMICS, 2013, 9 : 1 - 8