Effect of metal Ions (Ni2+, Cu2+ and Zn2+) and water coordination on the structure of L-phenylalanine, L-tyrosine, L-tryptophan and their zwitterionic forms

被引:67
|
作者
Remko, Milan [1 ]
Fitz, Daniel [2 ]
Broer, Ria [3 ]
Rode, Bernd Michael [2 ]
机构
[1] Comenius Univ, Dept Pharmaceut Chem, SK-83232 Bratislava, Slovakia
[2] Univ Innsbruck, Inst Gen Inorgan & Theoret Chem, A-6020 Innsbruck, Austria
[3] Univ Groningen, Dept Theoret Chem, Zernike Inst Adv Mat, NL-9747 AG Groningen, Netherlands
关键词
Aromatic amino acids; Complexes involving the transition metals Ni2+; Cu2+ and Zn2+; DFT calculations; Molecular structure; Solvent effect; CATION-PI INTERACTIONS; AROMATIC-AMINO-ACIDS; PEPTIDE-BOND FORMATION; DENSITY-FUNCTIONAL-THEORY; GAS-PHASE; CONFORMATIONAL LANDSCAPES; INFRARED-SPECTROSCOPY; DIP SPECTROSCOPY; BINDING-SITES; HARTREE-FOCK;
D O I
10.1007/s00894-011-1000-0
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Methods of quantum chemistry have been applied to double-charged complexes involving the transition metals Ni2+, Cu2+ and Zn2+ with the aromatic amino acids (AAA) phenylalanine, tyrosine and tryptophan. The effect of hydration on the relative stability and geometry of the individual species studied has been evaluated within the supermolecule approach. The interaction enthalpies, entropies and Gibbs energies of nine complexes PheaEuro cent M, TyraEuro cent M, TrpaEuro cent M, (M = Ni2+, Cu2+ and Zn2+) were determined at the Becke3LYP density functional level of theory. Of the transition metals studied the bivalent copper cation forms the strongest complexes with AAAs. For Ni(2+)and Cu2+ the most stable species are the NO coordinated cations in the AAA metal complexes, Zn(2+)cation prefers a binding to the aromatic part of the AAA (complex II). Some complexes energetically unfavored in the gas-phase are stabilized upon microsolvation.
引用
收藏
页码:3117 / 3128
页数:12
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