Preparation of oligodeoxynucleotides containing 5-(N-methylpiperazinyl) and 5-benzyloxymethyl uracils

被引:0
|
作者
Megied, AESA [1 ]
Ali, OM
Kofoed, T
Pedersen, EB
机构
[1] Menoufia Univ, Fac Sci, Dept Chem, Shebien El Koam, Egypt
[2] Odense Univ, Dept Chem, DK-5230 Odense M, Denmark
来源
关键词
nucleosides; 5 '-O-DMT nucleosides; nucleoside-3 '-phosphoramidites; oligodeoxynucleotide;
D O I
暂无
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Deprotected compounds 1 and 9 were allowed to react with 4,4'-dimethoxytrityl chloride in pyridine to give 5'-O-DMT nucleosides 2 and 10. The 3'-phosphoramidites 4 and 11 were incorporated into oligodeoxynucleosides (ODNs). The hybridization properties of the modified ODNs with their complementary DNA strands were studied. Interesting results were obtained when 11 was inserted as a bulged nucleoside into TWAs, duplexes, and triplexes.
引用
收藏
页码:1 / 9
页数:9
相关论文
共 50 条
  • [22] Synthesis of oligodeoxynucleotides containing 5-aminouracil and its N-acetyl derivative
    Ferrer, E
    Neubauer, G
    Mann, M
    Eritja, R
    JOURNAL OF THE CHEMICAL SOCIETY-PERKIN TRANSACTIONS 1, 1997, (14): : 2051 - 2057
  • [23] X-ray and computational studies of some 5-(perfluoroalkenyl) uracils
    Pluskota, D
    Fiedorow, P
    Abboud, KA
    Klosin, J
    Koroniak, H
    JOURNAL OF FLUORINE CHEMISTRY, 2000, 102 (1-2) : 111 - 117
  • [24] SYNTHESIS AND BIOLOGICAL-ACTIVITIES OF 5-(2-ACYLVINYL)URACILS
    KUNDU, NG
    DASGUPTA, SK
    CHAUDHURI, LN
    MAHANTY, JS
    SPEARS, CP
    SHAHINIAN, AH
    ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY, 1992, 204 : 127 - MEDI
  • [25] 5-(acylethynyl)uracils, 5-(acylethynyl)-2′-deoxyuridines and 5-(acylethynyl)-1-(2-hydroxyethoxy)methyluracils.: Their synthesis, antiviral and cytotoxic activities
    Kundu, NG
    Mahanty, JS
    Chowdhury, C
    Dasgupta, SK
    Das, B
    Spears, CP
    Balzarini, J
    De Clercq, E
    EUROPEAN JOURNAL OF MEDICINAL CHEMISTRY, 1999, 34 (05) : 389 - 398
  • [26] On the Preparation of 5-(α-Diazoethyl)tetrazoles
    Moderhack, Dietrich
    Beißner, Andreas
    Zeitschrift fur Naturforschung - Section B Journal of Chemical Sciences, 1996, 51 (12): : 1815 - 1817
  • [27] ALKYLATED DERIVATIVES OF URACYL .I. SYNTHESIS AND PROPERTIES OF 5- AND 5,6-ALKYLATED URACILS
    DRAMINSKI, M
    FISZER, B
    ROCZNIKI CHEMII, 1969, 43 (03): : 499 - &
  • [28] AN ACID-CATALYZED HYDROXYALKYLATION OF URACIL - A FACILE SYNTHESIS OF 5-(ARYLHYDROXYMETHYL)URACILS
    LAM, BL
    PRIDGEN, LN
    JOURNAL OF ORGANIC CHEMISTRY, 1986, 51 (13): : 2592 - 2594
  • [29] Synthesis of oligodeoxynucleotides containing 5-(β-D-glycopyranosyloxymethyl)-2′-deoxyuridine, a modified nucleoside in the DNA of Trypanosoma Brucei
    de Kort, M
    Ebrahimi, E
    Wijsman, ER
    van der Marel, GA
    van Boom, JH
    EUROPEAN JOURNAL OF ORGANIC CHEMISTRY, 1999, 1999 (09) : 2337 - 2344
  • [30] Triplex formation of α-oligodeoxynucleotides containing 5-Me-α-dC(N-4-spermine)
    Meyer, A
    Morvan, F
    Rayner, B
    Imbach, JL
    NUCLEOSIDES & NUCLEOTIDES, 1999, 18 (6-7): : 1631 - 1632