Molecular characterization of full-length MLV-related endogenous retrovirus ChiRV1 from the chicken, Gallus gallus

被引：10
|
作者：
Borysenko, Leonid [1 ]
Stepanets, Volodymir [2 ]
Rynditch, Alla V. [1 ]
机构：
[1] Natl Acad Sci Ukraine, Dept Funct Genom, Inst Mol Biol & Genet, UA-03143 Kiev, Ukraine
[2] Acad Sci Czech Republic, Inst Mol Genet, Dept Cellular & Viral Genet, CR-16637 Prague, Czech Republic
来源：
VIROLOGY | 2008年 / 376卷 / 01期
关键词：
retrovirus; chicken endogenous; Avian; Murine leukemia virus; gammaretrovirus;
D O I：
10.1016/j.virol.2008.03.006
中图分类号：
Q93 [微生物学];
学科分类号：
071005 ; 100705 ;
摘要：
We report the first full-length sequence of an endogenous retrovirus from the genome of domestic chicken, that is not related to the Avian leukemia viruses (ALV). This retrovirus, designated ChiRV1, clusters with Murine leukemia virus (MLV)-related retroviruses and hence is the first complete gammaretrovirus from the genome of a bird. Nevertheless it is not related to exogenous MLV-related retroviruses infecting chicken. The provirus is 9133 bp long and contains 90%-identical LTRs as well as reading frames for the gag, pol and env genes, interrupted by in-frame stop codons. Expression analysis showed that ChiRV1 is a transcribed provirus. Screening of the chicken genome database revealed 100 ChiRV1 -related sequences that are grouped into three classes based upon LTR alignment and subsequent phylogenetic analysis. (c) 2008 Elsevier Inc. All rights reserved.
引用
收藏
页码：199 / 204
页数：6
相关论文
共 50 条
  • [41] Molecular characterization and phylogenetic analyses of full-length viral genomes from Iranian patients with chronic hepatitis B virus
    Khodadad, Nastaran
    Seyedian, Seyed Saeed
    Haghighi, Somayeh Biparva
    Makvandi, Manoochehr
    FUTURE VIROLOGY, 2021, 16 (10) : 667 - +
  • [42] Molecular modeling of full-length OxyR from Shewanella oneidensis MR-1 and molecular dynamics studies of the activation domain
    Guo, JT
    Xu, Y
    2004 IEEE COMPUTATIONAL SYSTEMS BIOINFORMATICS CONFERENCE, PROCEEDINGS, 2004, : 708 - 709
  • [43] Near full-length genomic characterization of a HIV type 1 BC recombinant strain from Manipur, India
    Sarkar, Roni
    Sarkar, Kamalesh
    Singh, N. Brajachand
    Singh, Y. Manihar
    Chakrabarti, Sekhar
    VIRUS GENES, 2012, 45 (02) : 201 - 206
  • [44] Near full-length genomic characterization of a HIV type 1 BC recombinant strain from Manipur, India
    Roni Sarkar
    Kamalesh Sarkar
    N. Brajachand Singh
    Y. Manihar Singh
    Sekhar Chakrabarti
    Virus Genes, 2012, 45 : 201 - 206
  • [45] Characterization of the full-length human immunodeficiency virus-1 genome from recently infected subjects in Brazil
    Sa-Filho, Dercy
    Kallas, Esper G.
    Sanabani, Sabri
    Sabino, Ester
    Sucupira, Maria Cecilia
    Sanchez-Rosa, Ana Carolina
    Tescarollo, Graziela
    Tomiyama, Helena
    Bassichetto, Katia
    Janini, Luis Mario
    Diaz, Ricardo Sobhie
    AIDS RESEARCH AND HUMAN RETROVIRUSES, 2007, 23 (09) : 1087 - 1094
  • [46] Construction and Characterization of Highly Infectious Full-Length Molecular Clones of a HIV-1 CRF07_BC Isolate from Xinjiang, China
    Wang, Zheng
    Hong, Kunxue
    Zhang, Jing
    Zhang, Lei
    Li, Dan
    Ren, Li
    Liang, Hua
    Shao, Yiming
    PLOS ONE, 2013, 8 (11):
  • [47] Construction and characterization of a full-length infectious molecular clone from the HIV type 1 subtype Thai-B isolated in Henan Province, China
    Wang, Zheng
    Li, Jinyun
    Li, Lin
    Feng, Fuming
    Li, Hanping
    Bao, Zuoyi
    AIDS RESEARCH AND HUMAN RETROVIRUSES, 2008, 24 (02) : 251 - 257
  • [48] Expression, purification, and molecular characterization of a full-length thermostable alkaline protease gene from Bacillus subtilis DMA-09
    Dilara Abbas Bukhari
    Amina Barkat
    Abdul Rehman
    Biologia, 2021, 76 : 741 - 750
  • [49] Molecular Characterization of Near Full-Length Genomes of Hepatitis B Virus Isolated from Predominantly HIV Infected Individuals in Botswana
    Anderson, Motswedi
    Choga, Wonderful Tatenda
    Moyo, Sikhulile
    Bell, Trevor Graham
    Mbangiwa, Tshepiso
    Phinius, Bonolo Bonita
    Bhebhe, Lynnette
    Sebunya, Theresa Kibirige
    Lockman, Shahin
    Marlink, Richard
    Kramvis, Anna
    Essex, Max
    Musonda, Rosemary Mubanga
    Blackard, Jason Tory
    Gaseitsiwe, Simani
    GENES, 2018, 9 (09)
  • [50] Molecular characterization of an avian GA13-like infectious bronchitis virus full-length genome from Costa Rica
    Villalobos-Agüero R.A.
    Ramírez-Carvajal L.
    Zamora-Sanabria R.
    León B.
    Karkashian-Córdoba J.
    VirusDisease, 2021, 32 (2) : 347 - 353
12345