Definition of Late Onset Alzheimer's Disease and Anticipation Effect of Genome-Wide Significant Risk Variants: Pilot Study of the APOE e4 Allele

被引:11
|
作者
DeLuca, Vincenzo [1 ]
Spalletta, Gianfranco [2 ]
Souza, Renan P. [3 ]
Graff, Ariel [1 ]
Bastos-Rodrigues, Luciana [3 ]
Camargos Bicalho, Maria Aparecida [3 ]
机构
[1] Univ Toronto, Dept Psychiat, CAMH, Toronto, ON, Canada
[2] IRCCS Santa Lucia Fdn, Rome, Italy
[3] Univ Fed Minas Gerais, Belo Horizonte, MG, Brazil
关键词
Alzheimer's disease; Age at onset; Admixture analysis; Apolipoprotein E; Genome-wide association study; APOLIPOPROTEIN-E; POPULATIONS; FREQUENCY;
D O I
10.1159/000490739
中图分类号
Q189 [神经科学];
学科分类号
071006 ;
摘要
Background/Objectives: This study aims to investigate the role of apolipoprotein E (APOE) e4 influencing the age at onset (AAO) of Alzheimer's disease (AD). In AD, the AAO of dementia varies from 40 to 90 years. Usually, AD patients who develop symptoms before the age of 65 are considered as early-onset AD (EOAD). However, considering the heterogeneity of the AD onset, the definition of late-onset AD (LOAD) cannot rely on an arbitrary cut-off. Thus, we aim to validate the anticipation effect of the APOE e4 allele in LOAD. Methods/Overview: Firstly, the optimal number of AAO subgroups was determined using MCLUST for 3 AD samples from Italy, Brazil, and from the ADNI consortium. MCLUST selects the best-fitting model based on the Bayesian information criterion (BIC), and the ideal cut-off for separating early onset from late onset in each sample. Then, when the AAO was modeled for each sample, the finite mixture model (FMM) analysis was used to analyze the effect of the APOE e4 in determining the risk for anticipated onset in LOAD. For the Brazilian sample, the ancestry was incorporated as a covariate. The FMM results from the 3 samples were meta-analyzed using METAL. Results: We performed the AAO analysis on the APOE e4 in 474 Italian patients enrolled at the IRCCS Santa Lucia Foundation in Italy, 135 AD from the Outpatients Reference Center for Geriatrics from the Federal University of Minas Gerais in Brazil, and 376 from the ADNI consortium. Using this distribution model, we found that the specific LOAD cut-off was 64 for the Italian sample, 67 for the ADNI sample, and 74 for the Brazilian sample. The APOE e4 showed a significant anticipatory effect specific for LOAD in all 3 samples. The METAL analysis for the anticipatory e4 effect was genome-wide significant when analyzing the LOAD effect size under the fixed model (beta = -8.1; p < 0.0001). However, when analyzing EOAD there was no genome-wide significant anticipation effect (beta = 1.9244; p = 0.0219). Conclusions: This study showed that the mixture analysis can refine the ideal cut-off for defining LOAD as a homogeneous genetic entity. We also validated the e4 allele anticipatory effect only in LOAD. In summary, the tool developed in this study is a sophisticated statistical pipeline to analyze the AAO in genome-wide association studies of AD, to find new molecular targets as a new line of translational research to foster drug discovery.
引用
收藏
页码:8 / 12
页数:5
相关论文
共 50 条
  • [41] Effects of Multiple Genetic Loci on Age at Onset in Late-Onset Alzheimer Disease A Genome-Wide Association Study
    Naj, Adam C.
    Jun, Gyungah
    Reitz, Christiane
    Kunkle, Brian W.
    Perry, William
    Park, Yo Son
    Beecham, Gary W.
    Rajbhandary, Ruchita A.
    Hamilton-Nelson, Kara L.
    Wang, Li-San
    Kauwe, John S. K.
    Huentelman, Matthew J.
    Myers, Amanda J.
    Bird, Thomas D.
    Boeve, Bradley F.
    Baldwin, Clinton T.
    Jarvik, Gail P.
    Crane, Paul K.
    Rogaeva, Ekaterina
    Barmada, M. Michael
    Demirci, F. Yesim
    Cruchaga, Carlos
    Kramer, Patricia L.
    Ertekin-Taner, Nilufer
    Hardy, John
    Graff-Radford, Neill R.
    Green, Robert C.
    Larson, Eric B.
    St George-Hyslop, Peter H.
    Buxbaum, Joseph D.
    Evans, Denis A.
    Schneider, Julie A.
    Lunetta, Kathryn L.
    Kamboh, M. Ilyas
    Saykin, Andrew J.
    Reiman, Eric M.
    De Jager, Philip L.
    Bennett, David A.
    Morris, John C.
    Montine, Thomas J.
    Goate, Alison M.
    Blacker, Deborah
    Tsuang, Debby W.
    Hakonarson, Hakon
    Kukull, Walter A.
    Foroud, Tatiana M.
    Martin, Eden R.
    Haines, Jonathan L.
    Mayeux, Richard P.
    Farrer, Lindsay A.
    JAMA NEUROLOGY, 2014, 71 (11) : 1394 - 1404
  • [42] The association of the short variant of the 5-HTTPLR polymorphism and the apoE ε4 allele does not increase the risk for late onset Alzheimer's disease
    Oliveira, JRM
    Shimokomaki, CM
    Brito-Marques, PR
    Gallindo, RM
    Okuma, M
    Maia, LGS
    Otto, PA
    Passos-Bueno, HR
    Zatz, M
    MOLECULAR PSYCHIATRY, 1999, 4 (01) : 19 - 20
  • [43] Genome-wide association study identifies variants at CLU and PICALM associated with Alzheimer's disease
    Harold, Denise
    Abraham, Richard
    Hollingworth, Paul
    Sims, Rebecca
    Gerrish, Amy
    Hamshere, Marian L.
    Pahwa, Jaspreet Singh
    Moskvina, Valentina
    Dowzell, Kimberley
    Williams, Amy
    Jones, Nicola
    Thomas, Charlene
    Stretton, Alexandra
    Morgan, Angharad R.
    Lovestone, Simon
    Powell, John
    Proitsi, Petroula
    Lupton, Michelle K.
    Brayne, Carol
    Rubinsztein, David C.
    Gill, Michael
    Lawlor, Brian
    Lynch, Aoibhinn
    Morgan, Kevin
    Brown, Kristelle S.
    Passmore, Peter A.
    Craig, David
    McGuinness, Bernadette
    Todd, Stephen
    Holmes, Clive
    Mann, David
    Smith, A. David
    Love, Seth
    Kehoe, Patrick G.
    Hardy, John
    Mead, Simon
    Fox, Nick
    Rossor, Martin
    Collinge, John
    Maier, Wolfgang
    Jessen, Frank
    Schuermann, Britta
    van den Bussche, Hendrik
    Heuser, Isabella
    Kornhuber, Johannes
    Wiltfang, Jens
    Dichgans, Martin
    Froelich, Lutz
    Hampel, Harald
    Huell, Michael
    NATURE GENETICS, 2009, 41 (10) : 1088 - U61
  • [44] Genetic variants influencing human aging from late-onset Alzheimer's disease (LOAD) genome-wide association studies (GWAS)
    Shi, Hui
    Belbin, Olivia
    Medway, Christopher
    Brown, Kristelle
    Kalsheker, Noor
    Carrasquillo, Minerva
    Proitsi, Petroula
    Powell, John
    Lovestone, Simon
    Goate, Alison
    Younkin, Steven
    Passmore, Peter
    Morgan, Kevin
    NEUROBIOLOGY OF AGING, 2012, 33 (08)
  • [45] Genome wide association study for late-onset Alzheimer's disease in Japanese population
    Ozaki, K.
    Mitsumori, R.
    Niida, S.
    Shigemizu, D.
    EUROPEAN JOURNAL OF HUMAN GENETICS, 2019, 27 : 1441 - 1441
  • [46] An APOE Haplotype Associated with Decreased ε4 Expression Increases the Risk of Late Onset Alzheimer's Disease
    Lescai, Francesco
    Chiamenti, Andrea Maria
    Codemo, Alessandra
    Pirazzini, Chiara
    D'Agostino, Giuseppe
    Ruaro, Cristina
    Ghidoni, Roberta
    Benussi, Luisa
    Galimberti, Daniela
    Esposito, Federica
    Marchegiani, Francesca
    Cardelli, Maurizio
    Olivieri, Fabiola
    Nacmias, Benedetta
    Sorbi, Sandro
    Tagliavini, Fabrizio
    Albani, Diego
    Boneschi, Filippo Martinelli
    Binetti, Giuliano
    Santoro, Aurelia
    Forloni, Gianluigi
    Scarpini, Elio
    Crepaldi, Gaetano
    Gabelli, Carlo
    Franceschi, Claudio
    JOURNAL OF ALZHEIMERS DISEASE, 2011, 24 (02) : 235 - 245
  • [47] APOLIPOPROTEIN E4 GENE DOSE AFFECTS THE RISK OF ALZHEIMER-DISEASE IN LATE-ONSET FAMILIES
    CORDER, EH
    SAUNDERS, AM
    STRITTMATTER, WJ
    SCHMECHEL, D
    GASKELL, P
    SMALL, GW
    ROSES, AD
    HAINES, JL
    PERICAKVANCE, MA
    AMERICAN JOURNAL OF HUMAN GENETICS, 1993, 53 (03) : 203 - 203
  • [48] Apolipoprotein E ε4 allele and whole brain atrophy in late-onset Alzheimer's disease
    Yasuda, M
    Mori, E
    Kitagaki, H
    Yamashita, H
    Hirono, N
    Shimada, K
    Maeda, K
    Tanaka, C
    AMERICAN JOURNAL OF PSYCHIATRY, 1998, 155 (06): : 779 - 784
  • [49] Apolipoprotein E ε4 allele is a risk factor for late-onset Alzheimer's disease and vascular dementia in Han Chinese
    Zhang, JG
    Yang, JG
    Lin, ZX
    He, L
    Feng, GY
    Ma, XY
    Wang, CF
    Lu, PF
    Song, SB
    Dong, XZ
    St Clair, D
    Breen, G
    INTERNATIONAL JOURNAL OF GERIATRIC PSYCHIATRY, 2001, 16 (04) : 438 - 439
  • [50] Apolipoprotein E epsilon 4 allele, a risk factor for late onset nonfamilial Alzheimer's disease among Israeli Jews
    Friedman, G
    Gabizon, R
    BenYehuda, A
    ARCHIVES OF GERONTOLOGY AND GERIATRICS, 1997, 24 (02) : 175 - 181