Complete chloroplast genome sequence and phylogenetic analysis of Clerodendrum japonicum (Thunb.) Sweet (Ajugoideae, Lamiaceae)

被引：0
|
作者：
Chen, Gang [1 ]
Wang, Li-guo [2 ]
Wang, Ying-hua [1 ]
机构：
[1] Zhaoqing Univ, Coll Life Sci, Zhaoqing Ave, Zhaoqing 526061, Guangdong, Peoples R China
[2] Guangzhou Univ Chinese Med, Sch Pharmaceut Sci, Lab Germplasm Resources & Mol Identificat Tradit, Guangzhou, Guangdong, Peoples R China
来源：
MITOCHONDRIAL DNA PART B-RESOURCES | 2021年 / 6卷 / 08期
基金：
中国国家自然科学基金;
关键词：
Chloroplast genome; phylogenetic analysis; Clerodendrum japonicum (Thunb; ) Sweet; ALIGNMENT; TOOL;
D O I：
10.1080/23802359.2021.1944367
中图分类号：
Q3 [遗传学];
学科分类号：
071007 ; 090102 ;
摘要：
Clerodendrum japonicum (Thunb.) Sweet belongs to the genus Clerodendrum in the family Lamiaceae. It is an important medicinal plant with great ornamental and economic value. We sequenced and analyzed the complete chloroplast genome of C. japonicum by Illumina sequencing in this study. The full length of the complete chloroplast genome is 152,215 bp, containing a pair of inverted repeat regions of 25,705 bp (IRa and IRb) separated by a large single-copy region (LSC) of 83,491 bp and a small single-copy region (SSC) of 17,314 bp. The C. japonicum chloroplast genome encodes 131 genes, comprising 85 protein-coding genes, 37 tRNA genes, 8 rRNA genes, and 1 pseudogene. This study will be useful for further study on population, phylogenetic, and molecular genetic studies of this medicinal plant.
引用
收藏
页码：2218 / 2220
页数：3
相关论文
共 50 条
  • [41] The complete chloroplast genome of Nepal Holly, Ilex integra Thunb. (Aquifoliaceae)
    Park, Jongsun
    Kim, Yongsung
    Kwon, Woochan
    Nam, Suhwan
    Xi, Hong
    MITOCHONDRIAL DNA PART B-RESOURCES, 2019, 4 (01): : 1257 - 1258
  • [42] The complete chloroplast genome sequence of a warm season ornamental grass, Cenchrus alopecuroides Thunb. 1794 (Poaceae)
    Wang, Zhiyong
    Yan, Lulu
    Yue, Jianhua
    Teng, Yun
    Li, Peiling
    MITOCHONDRIAL DNA PART B-RESOURCES, 2023, 8 (05): : 561 - 564
  • [43] The complete chloroplast genome sequence of Clerodendrum cyrtophyllum from Guangzhou, China
    Xu, Shiqiang
    Huang, Weizhong
    Cai, Shike
    Wang, Jihua
    MITOCHONDRIAL DNA PART B-RESOURCES, 2022, 7 (06): : 1117 - 1119
  • [44] Characterization of the complete chloroplast genome of Houttuynia cordata Thunb and phylogenetic relationships
    Yang, Xue-Lian
    MITOCHONDRIAL DNA PART B-RESOURCES, 2020, 5 (01): : 605 - 606
  • [45] The complete chloroplast genome of Prunus japonica thunb.(Rosaceae), an ornamental and medicinal plant
    Mu, Jing
    Zhao, Yuyang
    He, Yali
    Sun, Jiahui
    Yuan, Qingjun
    MITOCHONDRIAL DNA PART B-RESOURCES, 2021, 6 (01): : 112 - 114
  • [46] The complete chloroplast genome sequence and phylogenetic analysis of Nanhaia speciosa (Fabaceae)
    Xiao, Yufei
    Li, Mimi
    Zhong, Lianxiang
    Qin, Yufeng
    Zhang, Xiaoning
    Wei, Qiulan
    Qin, Zihai
    Zhang, Ye
    Chen, Bowen
    MITOCHONDRIAL DNA PART B-RESOURCES, 2022, 7 (01): : 266 - 268
  • [47] The Complete Amomum kravanh Chloroplast Genome Sequence and Phylogenetic Analysis of the Commelinids
    Wu, Mingli
    Li, Qing
    Hu, Zhigang
    Li, Xiwen
    Chen, Shilin
    MOLECULES, 2017, 22 (11):
  • [48] Complete chloroplast genome sequence and phylogenetic analysis of Populus deltoides Caihong
    Zhuang, Weibing
    Shu, Xiaochun
    Zhang, Hui
    Wang, Tao
    Zhang, Fengjiao
    Wang, Ning
    Wang, Zhong
    MITOCHONDRIAL DNA PART B-RESOURCES, 2021, 6 (02): : 389 - 390
  • [49] Complete chloroplast genome sequence and phylogenetic analysis of Ilex pernyi Franch
    Wang, Dan
    Liu, Chang
    Li, Jin-jin
    Guo, Dong-qin
    Du, Hui-hui
    MITOCHONDRIAL DNA PART B-RESOURCES, 2021, 6 (12): : 3477 - 3479
  • [50] Complete chloroplast genome sequence of Rosa roxburghii and its phylogenetic analysis
    Wang, Qian
    Hu, Huan
    An, Jiaxing
    Bai, Guohui
    Ren, Qunli
    Liu, Jianguo
    MITOCHONDRIAL DNA PART B-RESOURCES, 2018, 3 (01): : 149 - 150
12345