Isolation and characterization of microsatellite loci in the Guanacaste tree, Enterolobium cyclocarpum

被引:5
|
作者
Peters, Maureen B. [1 ]
Hagen, Cris [1 ]
Trapnell, Dorset W. [2 ]
Hamrick, J. L. [3 ]
Rocha, Oscar
Smouse, Peter E. [4 ,5 ]
Glenn, Travis C. [1 ]
机构
[1] Univ Georgia, Savannah River Ecol Lab, Aiken, SC 29802 USA
[2] Univ Georgia, Inst Ecol, Athens, GA 30602 USA
[3] Univ Georgia, Dept Plant Biol, Athens, GA 30602 USA
[4] Kent State Univ, Dept Biol Sci, Kent, OH 44242 USA
[5] Rutgers State Univ, New Brunswick, NJ 08901 USA
来源
MOLECULAR ECOLOGY RESOURCES | 2008年 / 8卷 / 01期
关键词
Enterolobium cyclocarpum; Guanacaste tree; microsatellites; parentage analysis; PCR; pollen dispersal; population structure;
D O I
10.1111/j.1471-8286.2007.01896.x
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
We isolated nine microsatellite loci from the Guanacaste tree (Enterolobium cyclocarpum) and optimized them for future research on breeding populations of this species. Loci were screened across 53 individuals from one population and were shown to be variable with the number of alleles per locus ranging from five to 15. Polymorphic information content ranged from 0.420 to 0.900 and observed heterozygosity ranged from 0.547 to 0.906.
引用
收藏
页码:129 / 131
页数:3
相关论文
共 50 条
  • [1] Variation in the breeding behavior of the dry forest tree Enterolobium cyclocarpum (Guanacaste) in Costa Rica
    Rocha, OJ
    Aguilar, G
    [J]. AMERICAN JOURNAL OF BOTANY, 2001, 88 (09) : 1600 - 1606
  • [2] The Impact of Landscape Disturbance on Spatial Genetic Structure in the Guanacaste Tree, Enterolobium cyclocarpum (Fabaceae)
    Gonzales, Eva
    Hamrick, James L.
    Smouse, Peter E.
    Trapnell, Dorset W.
    Peakall, Rod
    [J]. JOURNAL OF HEREDITY, 2010, 101 (02) : 133 - 143
  • [3] Genetic variation and differentiation among five populations of the guanacaste tree (Enterolobium cyclocarpum Jacq) in Costa Rica
    Rocha, OJ
    Lobo, JA
    [J]. INTERNATIONAL JOURNAL OF PLANT SCIENCES, 1996, 157 (02) : 234 - 239
  • [4] Reproductive consequences of variation in flowering phenology in the dry forest tree Enterolobium cyclocarpum in Guanacaste, Costa Rica
    Rocha, Oscar J.
    Gomez, Carlos
    Hamrick, James L.
    Trapnell, Dorset W.
    Smouse, Peter E.
    Macaya, Gabriel
    [J]. AMERICAN JOURNAL OF BOTANY, 2018, 105 (12) : 2037 - 2050
  • [6] Isolation and characterization of microsatellite loci in the tree fern Alsophila spinulosa
    Zhou, Yuan
    Chen, Guo-Pei
    Wang, Ting
    [J]. AMERICAN FERN JOURNAL, 2008, 98 (01) : 42 - 45
  • [7] WHY ARE SEEDS OF THE CENTRAL AMERICAN GUANACASTE TREE, ENTEROLOBIUM-CYCLOCARPUM (LEGUMINOSAE, MIMOSOIDEAE), NOT ATTACKED BY BRUCHIDS (COLEOPTERA, BRUCHIDAE) EXCEPT IN PANAMA
    JOHNSON, CD
    JANZEN, DH
    [J]. ENVIRONMENTAL ENTOMOLOGY, 1982, 11 (02) : 373 - 377
  • [8] The effect of isolation method on properties of parota (Enterolobium cyclocarpum) starch
    Estrada-Leon, R. J.
    Moo-Huchin, V. M.
    Rios-Soberanis, C. R.
    Betancur-Ancona, D.
    May-Hernandez, L. H.
    Carrillo-Sanchez, F. A.
    Cervantes-Uc, J. M.
    Perez-Pacheco, E.
    [J]. FOOD HYDROCOLLOIDS, 2016, 57 : 1 - 9
  • [9] ISOLATION AND CHARACTERIZATION OF MICROSATELLITE LOCI IN THE ENDANGERED TREE DIPLOPANAX STACHYANTHUS (ARALIACEAE)
    Wang, Li
    Wu, Min
    Wen, Zhi
    Xia, Qiu-Ping
    Yan, Hai-Fei
    Luo, Zhi-Yong
    [J]. AMERICAN JOURNAL OF BOTANY, 2012, 99 (04) : E167 - E169
  • [10] Isolation and characterization of microsatellite loci in the tropical tree Jacaranda copaia (Bignoniaceae)
    Jones, FA
    Hubbell, SP
    [J]. MOLECULAR ECOLOGY NOTES, 2003, 3 (03): : 403 - 405