Mechanism and Origin of Chemical Selectivity in Oxaziridine-Based Methionine Modification: A Computational Study

被引:14
|
作者
Wang, Chen [1 ,3 ]
Jiang, Yuan-Ye [2 ]
Qi, Chen-Ze [1 ]
机构
[1] Shaoxing Univ, Zhejiang Key Lab Alternat Technol Fine Chem Proc, Shaoxing 312000, Peoples R China
[2] Qufu Normal Univ, Sch Chem & Chem Engn, Qufu 273165, Peoples R China
[3] Zhejiang Univ, Dept Chem, Hangzhou 310027, Zhejiang, Peoples R China
来源
JOURNAL OF ORGANIC CHEMISTRY | 2017年 / 82卷 / 18期
基金
中国博士后科学基金;
关键词
KETOMALONATE-DERIVED OXAZIRIDINE; SITE-SPECIFIC MODIFICATION; ALPHA-HYDRAZINO ACIDS; ELECTROPHILIC AMINATION; PROTEIN MODIFICATION; DENSITY FUNCTIONALS; PEPTIDE HYDRAZIDES; MEDIATED LIGATION; AMINO-ACIDS; BASIS-SETS;
D O I
10.1021/acs.joc.7b02026
中图分类号
O62 [有机化学];
学科分类号
070303 ; 081704 ;
摘要
Oxaziridine-based redox sulfur imidation provides a breakthrough strategy for selective modification at methionine in proteins. The chemoselectivity of imidization (N-transfer) over oxidation (O-transfer) of the thioether functionality of methionine, and the modification selectivity of methionine over other amino acids, are the key features of this strategy. To elucidate the detailed reaction mechanism and the origin of the reported chemoselectivity, a theoretical investigation on the oxaziridine-based methionine modification reaction is reported. It is found that both the N-transfer and O-transfer pathways occur in a concerted mechanism. Distortion/interaction activation strain model analysis indicates that the N-transfer chemoselectivity is mainly controlled by the interaction energy. Orbital and charge analysis further supports that the interaction energy resulting from the orbital interaction favors the N-transfer pathway at the early stage of the reaction. The calculated reactivity of eight potential amino acid competitors with the oxaziridine shows excellent selectivity for methionine modification, consistent with the experimental observations. The scarcity of active species in neutral aqueous solution leads to the weak reactivity of tyrosine, lysine, and arginine. The stronger charge-transfer interactions between methionine and the oxaziridine compared with that for the other amino acids also play vital roles in the modification selectivity.
引用
收藏
页码:9765 / 9772
页数:8
相关论文
共 50 条
  • [41] Computational study of regiodivergent pathways in the coppercatalyzed borocyanation of 1,3-dienes: Mechanism and origin of regioselectivity
    Guo, Xianming
    Wang, Ting
    Zheng, Yinjian
    Zhou, Luoyi
    Li, Juan
    JOURNAL OF ORGANOMETALLIC CHEMISTRY, 2019, 904
  • [42] Quantum chemical study on the mechanism and selectivity of [3 + 2] cycloaddition reactions of aryl nitrile oxides with furanone
    Harun Abdullah
    Ernest Opoku
    Theoretical Chemistry Accounts, 2022, 141
  • [43] Computational Study of Iron-Catalyzed Intramolecular [2+2] Cycloaddition and Cycloisomerization of Enyne Acetates: Mechanism and Selectivity
    Wang, Haoran
    Zhou, Qingyang
    Gao, Ailin
    Shang, Zhenfeng
    Li, Ruifang
    Xu, Xiufang
    JOURNAL OF ORGANIC CHEMISTRY, 2023, 88 (02): : 944 - 951
  • [44] A chemical lipid modification of recombinant preS antigen to study the mechanism of HBV attachment to the host cell
    Chen, Bin
    Lian, Min
    Xu, Shili
    Luo, Ming
    Zheng, Xiaofeng
    JOURNAL OF BIOTECHNOLOGY, 2008, 137 (1-4) : 8 - 13
  • [45] Computational Study of Molecular Complexes Based on Ammonia Alane for Chemical Hydrogen Storage
    Nguyen, Vinh Son
    Swinnen, Saartje
    Nguyen, Minh Tho
    Dixon, David A.
    JOURNAL OF PHYSICAL CHEMISTRY C, 2009, 113 (43): : 18914 - 18926
  • [46] Enhanced Activity and Selectivity for Nitrogen Reduction Reaction in Electrides-Based Heterostructures: A DFT Computational Study
    Wijesingha, Hetti
    Wan, Tsz Lok
    Liu, Junxian
    Kou, Liangzhi
    CHEMSUSCHEM, 2024, 17 (20)
  • [47] Quantum chemical study on the mechanism and selectivity of [3+2] cycloaddition reactions of aryl nitrile oxides with furanone
    Abdullah, Harun
    Opoku, Ernest
    THEORETICAL CHEMISTRY ACCOUNTS, 2022, 141 (10)
  • [48] Study on modification of Cu-based oxygen carrier for chemical looping combustion
    Hou-yin Zhao
    Yan Cao
    William Orndorff
    Wei-ping Pan
    Journal of Thermal Analysis and Calorimetry, 2013, 113 : 1123 - 1128
  • [49] Study on modification of Cu-based oxygen carrier for chemical looping combustion
    Zhao, Hou-yin
    Cao, Yan
    Orndorff, William
    Pan, Wei-ping
    JOURNAL OF THERMAL ANALYSIS AND CALORIMETRY, 2013, 113 (03) : 1123 - 1128
  • [50] Molecular dynamics-based study of the modification mechanism of asphalt by graphene oxide
    Zhenghong Xu
    Zijia Xiong
    Minghui Gong
    Qing Zeng
    Jinxiang Hong
    Jin Fan
    Journal of Molecular Modeling, 2023, 29