High-throughput analysis of spatio-temporal dynamics in Dictyostelium

被引:38
|
作者
Sawai, Satoshi [1 ]
Guan, Xiao-Juan
Kuspa, Adam
Cox, Edward C.
机构
[1] Princeton Univ, Dept Mol Biol, Princeton, NJ 08544 USA
[2] JST, ERATO Complex Syst Biol Project, Tokyo 1538902, Japan
[3] Baylor Coll Med, Dept Biochem, Houston, TX 77030 USA
[4] Baylor Coll Med, Dept Mol & Human Genet, Houston, TX 77030 USA
关键词
D O I
10.1186/gb-2007-8-7-r144
中图分类号
Q81 [生物工程学(生物技术)]; Q93 [微生物学];
学科分类号
071005 ; 0836 ; 090102 ; 100705 ;
摘要
We demonstrate a time-lapse video approach that allows rapid examination of the spatio-temporal dynamics of Dictyostelium cell populations. Quantitative information was gathered by sampling life histories of more than 2,000 mutant clones from a large mutagenesis collection. Approximately 4% of the clonal lines showed a mutant phenotype at one stage. Many of these could be ordered by clustering into functional groups. The dataset allows one to search and retrieve movies on a gene-by-gene and phenotype-by-phenotype basis.
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页数:15
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