Manganese citrate improves base-calling accuracy in DNA sequencing reactions using rhodamine-based fluorescent dye-terminators

被引:7
|
作者
Korch, C
Drabkin, H
机构
[1] Univ Colorado, Hlth Sci Ctr, Canc Ctr DNA Sequencing & Anal Core, Denver, CO 80262 USA
[2] Univ Colorado, Hlth Sci Ctr, Sch Med, Div Med Oncol, Denver, CO 80262 USA
关键词
D O I
10.1093/nar/27.5.1405
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
While dideoxy-terminators labeled with rhodamine-based fluorescent dyes provide the most versatile method of automated DNA sequencing, variation in peak heights reduces base-calling accuracy. We describe a simple approach that uses additions of a manganese salt and the metal buffer sodium citrate (MnCit) to overcome this limitation. This modification reduces peak height variability >2-fold and significantly increases the number of accurately read bases in DNA sequences.
引用
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页码:1405 / 1407
页数:3
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