Characterization of complete chloroplast genome of Angelica sinensis (Apiaceae), an endemic medical plant to China

被引:7
|
作者
Tian, Enwei [1 ]
Liu, Qiandian [2 ]
Chen, Wenna [3 ]
Li, Fang [1 ]
Chen, Aimin [1 ]
Li, Chan [1 ]
Chao, Zhi [1 ]
机构
[1] Southern Med Univ, Sch Tradit Chinese Med, Guangzhou 510515, Guangdong, Peoples R China
[2] Guangzhou Med Univ, Affiliated Canc Hosp & Inst, Guangzhou, Guangdong, Peoples R China
[3] Hebei Univ Engn, Coll Landscape & Ecol Engn, Handan, Peoples R China
来源
MITOCHONDRIAL DNA PART B-RESOURCES | 2019年 / 4卷 / 01期
基金
中国国家自然科学基金;
关键词
Angelica sinensis; chloroplast genome; phylogenetic relationships; SEQUENCE;
D O I
10.1080/23802359.2018.1544862
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
Angelica sinensis is a famous traditional Chinese medicinal herb which is used with a long history in China. However, presently, it is on the verge of extinction due to over-exploitation and habitat destruction. To conduct population genomic studies and offer strategies of conservation and management, we sequenced the complete chloroplast genome of A. sinensis using the next-generation sequencing technology. The complete cp genome is 142,822 bp in length, which contains a large single-copy region (LSC) of 99,964 bp, a small single-copy (SSC) region of 17,750 bp, and two inverted repeat (IRa and IRb) regions of 12,554 bp. The G + C content of cp genome is 37.4%. The genome comprises a total of 128 genes, including 83 protein-coding genes, eight ribosomal RNA(rRNA) genes and 35 transfer RNA (tRNA). Phylogenetic inference indicated that A. sinensis was closely related to A. gigas, A. decursiva, A. nitida and A.dahurica.
引用
收藏
页码:158 / 159
页数:2
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