The complete chloroplast genome of Pseudotsuga sinensis, a China endemic species

被引:0
|
作者
Li, Wang Jun [1 ]
Feng, Tu [1 ]
Li, Jun [2 ]
He, Bin [1 ]
Zou, Shun [1 ]
Liu, Peng Ju [3 ]
机构
[1] Guizhou Univ Engn Sci, Guizhou Prov Key Lab Ecol Protect & Restorat Typ P, Bijie, Peoples R China
[2] Nat Reserve Serv Stn Pseudotsuga Sinensis Weining, Bijie, Peoples R China
[3] Chinese Acad Sci, Kunming Inst Bot, Key Lab Plant Divers & Biogeog East Asia, Kunming, Peoples R China
来源
MITOCHONDRIAL DNA PART B-RESOURCES | 2023年 / 8卷 / 01期
关键词
Pseudotsuga sinensis; chloroplast genome; phylogeny;
D O I
10.1080/23802359.2022.2080012
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
In this study, we collected plant material from Pseudotsuga sinensis in Guizhou, China, and sequenced it. The complete chloroplast genome consisted of 122,243 bp, including a large single-copy (LSC) region, a small single-copy (SSC) region, and two inverted repeat regions like those in P. sinensis var. wilsoniana. The GC content of P. sinensis and P. sinensis var. wilsoniana are 38.7% and 38.8%, respectively. The reconstructed phylogenetic tree reveals that P. sinensis was a sister species to P. sinensis var. wilsoniana. Hence, the availability of the chloroplast genome of P. sinensis will promote further phylogenetic studies of the family Pinaceae.
引用
收藏
页码:23 / 25
页数:3
相关论文
共 50 条
  • [1] The complete chloroplast genome of Dipteronia sinensis (Aceraceae), an endangered endemic species to China
    Zhou, Tao
    Zhao, Ji-Xiang
    Yang, Yan-Ci
    Bai, Guo-Qing
    Chen, Chen
    Zhao, Gui-Fang
    MITOCHONDRIAL DNA PART A, 2017, 28 (1-2) : 123 - 124
  • [2] Complete chloroplast genome of Isoetes sinensis, an endemic fern in China
    Xie, YaCong
    Cheng, Hui-Shan
    Chen, Yu
    Liu, Zhong-Jian
    Lin, Si-Zu
    MITOCHONDRIAL DNA PART B-RESOURCES, 2019, 4 (02): : 3276 - 3277
  • [3] Characterization of the complete chloroplast genome of Cephalotaxus sinensis (Cephalotaxaceae), an endangered species endemic to China
    Qiang, Xu
    Yang, Yun
    Jia, Yun
    Ren, Ting
    Bai, Guo-Qing
    CONSERVATION GENETICS RESOURCES, 2019, 11 (02) : 133 - 135
  • [4] The complete chloroplast genome of Dunnia sinensis (Rubiaceae): a monotypic species endemic to Guangdong, China
    Zhang, Ying
    Chen, Sheng
    Xu, Xianyi
    Wang, Ruijiang
    MITOCHONDRIAL DNA PART B-RESOURCES, 2020, 5 (01): : 814 - 816
  • [5] Characterization of the complete chloroplast genome of Cephalotaxus sinensis (Cephalotaxaceae), an endangered species endemic to China
    Xu Qiang
    Yun Yang
    Yun Jia
    Ting Ren
    Guo-Qing Bai
    Conservation Genetics Resources, 2019, 11 : 133 - 135
  • [6] The complete chloroplast genome sequence of Annamocarya sinensis (Juglandaceae), an Endangered species endemic to Yunnan Province, China
    Ji, Yuman
    Zhang, Wanjie
    Li, Dan
    Shen, Lixin
    MITOCHONDRIAL DNA PART B-RESOURCES, 2020, 5 (03): : 2021 - 2023
  • [7] The complete chloroplast genome of Vaccinium duclouxii, an endemic species in China
    Chen, Xin
    Liu, Qingzhong
    Guo, Wei
    Wei, Hairong
    Wang, Jiawei
    Zhu, Dongzi
    Tan, Yue
    MITOCHONDRIAL DNA PART B-RESOURCES, 2019, 4 (02): : 2215 - 2216
  • [8] The complete chloroplast genome of Primula helodoxa, a species endemic to China
    Zhang, Li
    Chen, Xiong
    Huang, Yuan
    Wu, Zhikun
    MITOCHONDRIAL DNA PART B-RESOURCES, 2020, 5 (01): : 194 - 195
  • [9] Characterization of complete chloroplast genome of Angelica sinensis (Apiaceae), an endemic medical plant to China
    Tian, Enwei
    Liu, Qiandian
    Chen, Wenna
    Li, Fang
    Chen, Aimin
    Li, Chan
    Chao, Zhi
    MITOCHONDRIAL DNA PART B-RESOURCES, 2019, 4 (01): : 158 - 159
  • [10] Characteristic of the complete chloroplast genome ofSymphoricarpos sinensis, an important ornamental plant endemic to China
    Zhang, Yi
    Zhang, Qing Yuan
    Ran, Hang
    Cao, Yanan
    MITOCHONDRIAL DNA PART B-RESOURCES, 2020, 5 (03): : 3188 - 3189