Symmetry-Based Crystal Structure Enumeration in Two Dimensions

被引:5
|
作者
Pretti, Evan [2 ]
Shen, Vincent K. [1 ]
Mittal, Jeetain [2 ]
Mahynski, Nathan A. [1 ]
机构
[1] NIST, Chem Sci Div, Gaithersburg, MD 20899 USA
[2] Lehigh Univ, Dept Chem & Biomol Engn, Bethlehem, PA 18015 USA
来源
JOURNAL OF PHYSICAL CHEMISTRY A | 2020年 / 124卷 / 16期
基金
美国国家科学基金会;
关键词
STRUCTURE PREDICTION; GLOBAL OPTIMIZATION; ALGORITHM; CLUSTERS;
D O I
10.1021/acs.jpca.0c00846
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
The accurate prediction of stable crystalline phases is a long-standing problem encountered in the study of conventional atomic and molecular solids as well as soft materials. One possible solution involves enumerating a reasonable set of candidate structures and then screening them to identify the one(s) with the lowest (free) energy. Candidate structures in this set can also serve as starting points for other routines, such as genetic algorithms, which search via optimization. Here, we present a framework for crystal structure enumeration of two-dimensional systems that utilizes a combination of symmetry- and stoichiometry-imposed constraints to compute valid configurations of particles that tile Euclidean space. With mild assumptions, this produces a computationally tractable total number of proposed candidates, enabling multicomponent systems to be screened by direct enumeration of possible crystalline ground states. The python code that enables these calculations is available at https:// github.com/usnistgov/PACCS.
引用
收藏
页码:3276 / 3285
页数:10
相关论文
共 50 条
  • [41] A Symmetry-Based Method for LiDAR Point Registration
    Cheng, Liang
    Wu, Yang
    Chen, Song
    Zong, Wenwen
    Yuan, Yi
    Sun, Yuefan
    Zhuang, Qizhi
    Li, Manchun
    IEEE JOURNAL OF SELECTED TOPICS IN APPLIED EARTH OBSERVATIONS AND REMOTE SENSING, 2018, 11 (01) : 285 - 299
  • [42] Kernel methods for point symmetry-based clustering
    Cleuziou, Guillaume
    Moreno, Jose G.
    PATTERN RECOGNITION, 2015, 48 (09) : 2812 - 2830
  • [43] A Symmetry-Based Decomposition Approach to Eigenvalue Problems
    Jun Fang
    Xingyu Gao
    Aihui Zhou
    Journal of Scientific Computing, 2013, 57 : 638 - 669
  • [44] A symmetry-based formal synthesis of Zaragozic acid A
    Freeman-Cook, KD
    Halcomb, RL
    JOURNAL OF ORGANIC CHEMISTRY, 2000, 65 (19): : 6153 - 6159
  • [45] SYMMETRY-BASED DETECTION OF NUCLEI IN MICROSCOPY IMAGES
    Ram, Sundaresh
    Rodriguez, Jeffrey J.
    2013 IEEE INTERNATIONAL CONFERENCE ON ACOUSTICS, SPEECH AND SIGNAL PROCESSING (ICASSP), 2013, : 1128 - 1132
  • [46] Chaotic Communication System with Symmetry-Based Modulation
    Karimov, Timur
    Rybin, Vyacheslav
    Kolev, Georgii
    Rodionova, Ekaterina
    Butusov, Denis
    APPLIED SCIENCES-BASEL, 2021, 11 (08):
  • [47] Symmetry-Based Transformable and Foldable Plate Structures
    Beatini, Valentina
    JOURNAL OF MECHANICAL DESIGN, 2017, 139 (07)
  • [48] Symmetry-based representation for registration of multimodal images
    Soleimani, Mojtaba
    Aghagolzadeh, Ali
    Ezoji, Mehdi
    MEDICAL & BIOLOGICAL ENGINEERING & COMPUTING, 2022, 60 (04) : 1015 - 1032
  • [49] Relationships between symmetry-based graph measures
    Ma, Yuede
    Dehmer, Matthias
    Kunzi, Urs-Martin
    Mowshowitz, Abbe
    Tripathi, Shailesh
    Ghorbani, Modjtaba
    Emmert-Streib, Frank
    INFORMATION SCIENCES, 2021, 581 : 291 - 303
  • [50] Symmetry-based inference in an instrumental variable setting
    Bekker, Paul A.
    Lawford, Steve
    JOURNAL OF ECONOMETRICS, 2008, 142 (01) : 28 - 49