Whole-exome sequencing is a valuable diagnostic tool for inherited peripheral neuropathies: Outcomes from a cohort of 50 families

被引:43
|
作者
Hartley, T. [1 ]
Wagner, J. D. [1 ]
Warman-Chardon, J. [1 ,2 ]
Tetreault, M. [3 ]
Brady, L. [4 ]
Baker, S. [5 ]
Tarnopolsky, M. [4 ]
Bourque, P. R. [6 ]
Parboosingh, J. S. [7 ]
Smith, C. [7 ]
McInnes, B. [7 ]
Innes, A. M. [7 ,8 ]
Bernier, F. [7 ,8 ]
Curry, C. J. [9 ]
Yoon, G. [10 ,11 ]
Horvath, G. A. [12 ]
Bareke, E. [3 ]
Gillespie, M. [1 ]
Majewski, J. [3 ]
Bulman, D. E. [1 ]
Dyment, D. A. [1 ,2 ]
Boycott, K. M. [1 ,2 ]
机构
[1] Univ Ottawa, Childrens Hosp Eastern Ontario, Res Inst, Ottawa, ON, Canada
[2] Childrens Hosp Eastern Ontario, Dept Genet, 401 Smyth Rd, Ottawa, ON K1H 8L1, Canada
[3] McGill Univ, Dept Human Genet, Montreal, PQ, Canada
[4] McMaster Univ, Dept Pediat, Med Ctr, Hamilton, ON, Canada
[5] McMaster Univ, Med Ctr, Dept Med, Hamilton, ON, Canada
[6] Univ Ottawa, Dept Med, Ottawa, ON, Canada
[7] Univ Calgary, Cumming Sch Med, Dept Med Genet, Calgary, AB, Canada
[8] Univ Calgary, Alberta Childrens Hosp, Res Inst, Calgary, AB, Canada
[9] Univ Calif San Francisco, Dept Pediat, San Francisco, CA USA
[10] Univ Toronto, Hosp Sick Children, Div Neurol, Toronto, ON, Canada
[11] Univ Toronto, Hosp Sick Children, Div Clin & Metab Genet, Toronto, ON, Canada
[12] Univ British Columbia, BC Childrens Hosp, Dept Pediat, Div Biochem Dis, Vancouver, BC, Canada
基金
加拿大健康研究院;
关键词
diagnostic utility; hereditary motor and sensory neuropathy; inherited peripheral neuropathy; next-generation sequencing; whole-exome sequencing; DISEASE GENE-DISCOVERY; INTELLECTUAL DISABILITY; MATCHMAKER EXCHANGE; SPASTIC PARAPARESIS; MUTATIONS; KIF1A; GUIDELINES; PHENOTYPE; HYPOTONIA;
D O I
10.1111/cge.13101
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
The inherited peripheral neuropathies (IPNs) are characterized by marked clinical and genetic heterogeneity and include relatively frequent presentations such as Charcot-Marie-Tooth disease and hereditary motor neuropathy, as well as more rare conditions where peripheral neuropathy is associated with additional features. There are over 250 genes known to cause IPN-related disorders but it is estimated that in approximately 50% of affected individuals a molecular diagnosis is not achieved. In this study, we examine the diagnostic utility of whole-exome sequencing (WES) in a cohort of 50 families with 1 or more affected individuals with a molecularly undiagnosed IPN with or without additional features. Pathogenic or likely pathogenic variants in genes known to cause IPN were identified in 24% (12/50) of the families. A further 22% (11/50) of families carried sequence variants in IPN genes in which the significance remains unclear. An additional 12% (6/50) of families had variants in novel IPN candidate genes, 3 of which have been published thus far as novel discoveries (KIF1A, TBCK, and MCM3AP). This study highlights the use of WES in the molecular diagnostic approach of highly heterogeneous disorders, such as IPNs, places it in context of other published neuropathy cohorts, while further highlighting associated benefits for discovery.
引用
收藏
页码:301 / 309
页数:9
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