Genomic characterization of a cell-culture-adapted Korean human G9P[8] rotavirus, CAU05-202

被引：2
|
作者：
Shin, Jong Wook [2 ]
Van Phan Le [1 ]
Van Thai Than [1 ]
Lim, Inseok [3 ]
Yoon, Yoosik [1 ]
Kim, Kijeong [1 ]
Chung, Sang-In [1 ]
Myung, Soon Chul [4 ]
Kim, Wonyong [1 ]
机构：
[1] Chung Ang Univ, Coll Med, Dept Microbiol, Seoul 156756, South Korea
[2] Chung Ang Univ, Coll Med, Dept Internal Med, Seoul 156756, South Korea
[3] Chung Ang Univ, Coll Med, Dept Pediat, Seoul 156756, South Korea
[4] Chung Ang Univ, Coll Med, Dept Urol, Seoul 156756, South Korea
来源：
ARCHIVES OF VIROLOGY | 2012年 / 157卷 / 04期
关键词：
G9; ROTAVIRUSES; SOUTH-KOREA; MOLECULAR CHARACTERIZATION; PHYLOGENETIC ANALYSIS; GENETIC-VARIATION; STRAINS; CHILDREN; SEQUENCE; NSP4; SURVEILLANCE;
D O I：
10.1007/s00705-012-1232-z
中图分类号：
Q93 [微生物学];
学科分类号：
071005 ; 100705 ;
摘要：
The human rotavirus G9 strain is the fifth most common rotavirus worldwide. A human rotavirus G9P[8] strain CAU05-202 was isolated from a young child with diarrhea using a cell culture system, and its major gene sequences were determined. Phylogenetic analysis of the VP7 gene revealed that CAU05-202 clustered into genetic lineage III-d and was most closely related to G9 rotaviruses from Turkey (strain GUH13) and Sri Lanka (strain 05SLC056 and 05SLC057). VP4 and NSP4 gene analysis showed that CAU05-202 belongs to the P[8]-3 lineage and genotype B, respectively. In addition, CAU05-202 has a long RNA electropherotype, supported by VP6 gene analysis, which is clearly associated with subgroup II specificity. Analysis of the G9 rotavirus strain CAU05-202 provides information concerning the genetic relationships among global rotavirus G9 strains, suggesting that closely related G9 strains are persistent and widespread in Asian countries.
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收藏
页码：753 / 759
页数：7
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