Identification of drug-target interactions via multi-view graph regularized link propagation model

被引:29
|
作者
Ding, Yijie [1 ]
Tang, Jijun [2 ,3 ]
Guo, Fei [4 ]
机构
[1] Suzhou Univ Sci & Technol, Sch Elect & Informat Engn, Suzhou 215009, Peoples R China
[2] Chinese Acad Sci, Shenzhen Inst Adv Technol, Shenzhen 518055, Peoples R China
[3] Univ South Carolina, Dept Comp Sci & Engn, Columbia, SC 29208 USA
[4] Cent South Univ, Sch Comp Sci & Engn, Changsha 410083, Peoples R China
基金
美国国家科学基金会;
关键词
Drug-target interactions; Bipartite network; Multi-view learning; Link prediction; Graph regularized model; INTERACTION PREDICTION; INFORMATION; INTEGRATION; MATRIX; KERNELS;
D O I
10.1016/j.neucom.2021.05.100
中图分类号
TP18 [人工智能理论];
学科分类号
081104 ; 0812 ; 0835 ; 1405 ;
摘要
Diseases are usually caused by body's own defects protein or the functional structure of viral proteins. Effective drugs can be combined with these proteins well and remove original functions to achieve the therapeutic effect. The biochemical approaches of drug-target interactions (DTIs) determination is expen-sive and time-consuming. Therefnal-based methods have been proposed to predict new DTIs. In order to solve the problem of multiple information fusion, we propose a multi-view graph regularized link prop-agation model (MvGRLP) to predict new DTIs. Multi-view learning could use the complementary and cor-related information between different views (features). Compared with existing models, our method achieves comparable and best results on four benchmark datasets. (c) 2021 Elsevier B.V. All rights reserved.
引用
收藏
页码:618 / 631
页数:14
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