Complete Genome Sequence of a Hepatitis E Virus Genotype 1e Strain from an Outbreak in Nigeria, 2017

被引:11
|
作者
Akanbi, Olusola Anuoluwapo [1 ,2 ]
Harms, Dominik [1 ]
Wang, Bo [1 ]
Opaleye, Oluyinka Oladele [2 ]
Adesina, Olufisayo [1 ]
Osundare, Folakemi Abiodun [1 ,2 ]
Ogunniyi, Abiodun [3 ]
Naidoo, Dhamari [4 ]
Devaux, Isabelle [5 ]
Wondimagegnehu, Alemu [5 ]
Peter, Clement [5 ]
Ifeanyi, Okudo [5 ]
Ogundiran, Opeayo [5 ]
Ugochukwu, Uzoma [5 ]
Mba, Nwando [3 ]
Omilabu, Sunday A. [6 ]
Ihekweazu, Chlkwe [3 ]
Bock, C-Thomas [1 ,7 ]
机构
[1] Robert Koch Inst, Div Viral Gastroenteritis & Hepatitis Pathogens &, Dept Infect Dis, Berlin, Germany
[2] Ladoke Akintola Univ Technol, Ogbomosho, Oyo State, Nigeria
[3] Nigeria Ctr Dis Control, Jabi, Abuja, Nigeria
[4] WHO, Infect Hazard Management Dept, Geneva, Switzerland
[5] World Hlth Org Nigeria, Abuja, Nigeria
[6] Univ Lagos, Dept Med Microbiol & Parasitol, Coll Med, Lagos, Nigeria
[7] Univ Tubingen, Inst Trop Med, Tubingen, Germany
来源
MICROBIOLOGY RESOURCE ANNOUNCEMENTS | 2019年 / 8卷 / 01期
关键词
D O I
10.1128/MRA.01378-18
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
Hepatitis E virus genotype 1 (HEV-1) is associated with large epidemics. Notably, HEV subtype 1e (HEV-1e) has caused HEV outbreaks in sub-Saharan Africa. We report here the second full-length genome sequence of an HEV-1e strain (NG/17-0503) from a recent outbreak in Nigeria in 2017. It shares 94.2% identity with an HEV-1e strain from Chad.
引用
收藏
页数:3
相关论文
共 50 条
  • [31] A hepatitis E outbreak by genotype 4 virus in Shandong province, China
    Zhang, Li
    Yan, Bingyu
    Xu, Aiqiang
    [J]. VACCINE, 2016, 34 (33) : 3715 - 3718
  • [32] Virulent Strain of Hepatitis E Virus Genotype 3, Japan
    Takahashi, Kazuaki
    Okamoto, Hiroaki
    Abe, Natsumi
    Kawakami, Manri
    Matsuda, Hiroyuki
    Mochida, Satoshi
    Sakugawa, Hiroshi
    Suginoshita, Yoshiki
    Watanabe, Seishiro
    Yamamoto, Kazuhide
    Miyakawa, Yuzo
    Mishiro, Shunji
    [J]. EMERGING INFECTIOUS DISEASES, 2009, 15 (05) : 704 - 709
  • [33] New strains of hepatitis B virus genotype E circulating in Nigeria
    Oladeinde, Bankole H.
    Ekejindu, Ifeoma M.
    Omoregie, Richard
    Odia, Ikpomwonosa
    Aguh, Obiora D.
    Okwu, Uchechukwu M.
    [J]. INTERNATIONAL JOURNAL OF HEALTH SCIENCES-IJHS, 2018, 12 (06): : 25 - 29
  • [34] Phylogenetic Analysis and Characterization of the Complete Hepatitis E Virus Genome (Zoonotic Genotype 3) in Swine Samples from Mexico
    Sotomayor-Gonzalez, Alicia
    Trujillo-Ortega, Maria E.
    Taboada-Ramirez, Blanca I.
    Sandoval-Jaime, Carlos
    Sarmiento-Silva, Rosa E.
    [J]. VIRUSES-BASEL, 2018, 10 (08):
  • [35] Complete Genome Sequence of Border Disease Virus Genotype 3 Strain Gifhorn
    Fahnoe, Ulrik
    Hoeper, Dirk
    Schirrmeier, Horst
    Beer, Martin
    Rasmussen, Thomas Bruun
    [J]. GENOME ANNOUNCEMENTS, 2014, 2 (01)
  • [36] Full-genome nucleotide sequence of a hepatitis E virus strain that may be indigenous to Japan
    Takahashi, K
    Iwata, K
    Watanabe, N
    Hatahara, T
    Ohta, Y
    Baba, K
    Mishiro, S
    [J]. VIROLOGY, 2001, 287 (01) : 9 - 12
  • [37] Characterization of Full Genome of Rat Hepatitis E Virus Strain from Vietnam
    Li, Tian-Cheng
    Ami, Yasushi
    Suzaki, Yuriko
    Yasuda, Shumpei P.
    Yoshimatsu, Kumiko
    Arikawa, Jiro
    Takeda, Naokazu
    Takaji, Wakita
    [J]. EMERGING INFECTIOUS DISEASES, 2013, 19 (01) : 115 - 118
  • [38] Complete Genome Sequence of a New Ebola Virus Strain Isolated during the 2017 Likati Outbreak in the Democratic Republic of the Congo
    Wawina-Bokalanga, Tony
    Vanmechelen, Bert
    Marti-Carreras, Joan
    Vergote, Valentijn
    Vermeire, Kurt
    Muyembe-Tamfum, Jean-Jacques
    Ahuka-Mundeke, Steve
    Maes, Piet
    [J]. MICROBIOLOGY RESOURCE ANNOUNCEMENTS, 2019, 8 (20):
  • [39] Isolation and characterization of a genotype 4 Hepatitis E virus strain from an infant in China
    Wen Zhang
    Shixing Yang
    Quan Shen
    Junfeng Liu
    Tongling Shan
    Fen Huang
    Huibo Ning
    Yanjun Kang
    Zhibiao Yang
    Li Cui
    Jianguo Zhu
    Xiuguo Hua
    [J]. Virology Journal, 6
  • [40] Isolation and characterization of a genotype 4 Hepatitis E virus strain from an infant in China
    Zhang, Wen
    Yang, Shixing
    Shen, Quan
    Liu, Junfeng
    Shan, Tongling
    Huang, Fen
    Ning, Huibo
    Kang, Yanjun
    Yang, Zhibiao
    Cui, Li
    Zhu, Jianguo
    Hua, Xiuguo
    [J]. VIROLOGY JOURNAL, 2009, 6