Molecular dynamics simulations of β-cyclodextrin-aziadamantane complexes in water

被引:35
|
作者
Sellner, Bernhard [1 ]
Zifferer, Gerhard [1 ]
Kornherr, Andreas [2 ]
Krois, Daniel [3 ]
Brinker, Udo H. [3 ]
机构
[1] Univ Vienna, Inst Phys Chem, A-1090 Vienna, Austria
[2] Mondi Business Paper Serv AG, A-3363 Ulmerfeld Hausmening, Austria
[3] Univ Vienna, Inst Organ Chem, A-1090 Vienna, Austria
来源
JOURNAL OF PHYSICAL CHEMISTRY B | 2008年 / 112卷 / 03期
关键词
D O I
10.1021/jp075493+
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
Force-field-based atomistic simulations of host-guest supramolecular complexes between beta-cyclodextrin and several aziadamantane derivatives have been analyzed with respect to relative orientation and interaction energies, explicitly considering solvent (water) molecules. For each case, the calculations revealed two stable orientations of the guest within the host that are different in interaction energy. Fluctuation of and correlation between characteristic properties were analyzed. Among other things, it turned out that orientation angle and inclusion depth are clearly correlated. In addition, for the unsubstituted aziadamantane, the enthalpy of complex formation was calculated and compared to experimental results.
引用
收藏
页码:710 / 714
页数:5
相关论文
共 50 条
  • [21] THE CONFORMATIONAL BEHAVIOR OF COMPLEXES OF ALPHA-CYCLODEXTRIN WITH P-CHLOROPHENOL AND P-HYDROXYBENZOIC ACID IN WATER AS STUDIED BY MOLECULAR-DYNAMICS SIMULATIONS
    VANHELDEN, SP
    VANEIJCK, BP
    JANSSEN, LHM
    JOURNAL OF BIOMOLECULAR STRUCTURE & DYNAMICS, 1992, 9 (06): : 1269 - 1283
  • [22] MOLECULAR-DYNAMICS OF ALPHA-CYCLODEXTRIN INCLUSION COMPLEXES
    BEHR, JP
    LEHN, JM
    JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 1976, 98 (07) : 1743 - 1747
  • [23] Dynamics of eugenol included in β-cyclodextrin by nuclear magnetic resonance and molecular simulations
    Hernandez-Tanguma, Alejandro
    Ariza-Castolo, Armando
    MAGNETIC RESONANCE IN CHEMISTRY, 2024, 62 (07) : 505 - 511
  • [24] Molecular dynamics simulations and quantum chemical calculations on β-cyclodextrin spironolactone complex
    Philipp Weinzinger
    Petra Weiss-Greiler
    Walter Snor
    Helmut Viernstein
    Peter Wolschann
    Journal of Inclusion Phenomena and Macrocyclic Chemistry, 2007, 57 : 29 - 33
  • [25] Investigation of spectroscopic properties and molecular dynamics simulations of the interaction of mebendazole with β-cyclodextrin
    Yousef, Fakhri O.
    Ghanem, Raed
    Al-Sou'od, Khaldoun A.
    Alsarhan, Asia
    Abuflaha, Rasha K.
    Bodoor, Khaled
    Assaf, Khaleel I.
    El-Barghouthi, Musa I.
    JOURNAL OF THE IRANIAN CHEMICAL SOCIETY, 2021, 18 (01) : 75 - 86
  • [26] Molecular dynamics simulations and quantum chemical calculations on β-cyclodextrin spironolactone complex
    Weinzinger, Philipp
    Weiss-Greiler, Petra
    Snor, Walter
    Viernstein, Helmut
    Wolschann, Peter
    JOURNAL OF INCLUSION PHENOMENA AND MACROCYCLIC CHEMISTRY, 2007, 57 (1-4) : 29 - 33
  • [27] Investigation of spectroscopic properties and molecular dynamics simulations of the interaction of mebendazole with β-cyclodextrin
    Fakhri O. Yousef
    Raed Ghanem
    Khaldoun A. Al-Sou’od
    Asia Alsarhan
    Rasha K. Abuflaha
    Khaled Bodoor
    Khaleel I. Assaf
    Musa I. El-Barghouthi
    Journal of the Iranian Chemical Society, 2021, 18 : 75 - 86
  • [28] Molecular dynamics simulation of configurational properties of complexes between -cyclodextrin and 2,6-diaziadamantane in water
    Zifferer, Gerhard
    Kornherr, Andreas
    Brinker, Udo H.
    MOLECULAR SIMULATION, 2008, 34 (10-15) : 1177 - 1183
  • [29] Binding geometry of inclusion complex as a determinant factor for aqueous solubility of the flavonoid/β-cyclodextrin complexes based on molecular dynamics simulations
    Choi, YJ
    Lee, J
    Cho, KW
    Hwang, S
    Jeong, K
    Jung, S
    BULLETIN OF THE KOREAN CHEMICAL SOCIETY, 2005, 26 (08): : 1203 - 1208
  • [30] Box–Behnken design for studying inclusion complexes of triglycerides and α-cyclodextrin: application to the heating protocol in molecular-dynamics simulations
    Eduardo Walneide C. Almeida
    Cleber P. A. Anconi
    Willian Tássio G. Novato
    Marcone A. L. De Oliveira
    Wagner B. De Almeida
    Hélio F. Dos Santos
    Journal of Inclusion Phenomena and Macrocyclic Chemistry, 2011, 71 : 103 - 111