Integrated digital pathology at scale: A solution for clinical diagnostics and cancer research at a large academic medical center

被引:28
|
作者
Schueffler, Peter J. [1 ,2 ]
Geneslaw, Luke [1 ]
Yarlagadda, D. Vijay K. [1 ]
Hanna, Matthew G. [1 ]
Samboy, Jennifer [1 ]
Stamelos, Evangelos [1 ]
Vanderbilt, Chad [1 ]
Philip, John [1 ,3 ]
Jean, Marc-Henri [1 ]
Corsale, Lorraine [1 ]
Manzo, Allyne [1 ]
Paramasivam, Neeraj H. G. [4 ]
Ziegler, John S. [1 ]
Gao, Jianjiong [5 ]
Perin, Juan C. [4 ]
Kim, Young Suk [6 ]
Bhanot, Umeshkumar K. [1 ]
Roehrl, Michael H. A. [1 ,7 ]
Ardon, Orly [1 ]
Chiang, Sarah [1 ]
Giri, Dilip D. [1 ]
Sigel, Carlie S. [1 ]
Tan, Lee K. [1 ]
Murray, Melissa [1 ]
Virgo, Christina [1 ]
England, Christine [1 ]
Yagi, Yukako [1 ]
Sirintrapun, S. Joseph [1 ]
Klimstra, David [1 ]
Hameed, Meera [1 ]
Reuter, Victor E. [1 ]
Fuchs, Thomas J. [1 ,8 ]
机构
[1] Mem Sloan Kettering Canc Ctr, Dept Pathol, 1275 York Ave, New York, NY 10021 USA
[2] Tech Univ Munich, Inst Pathol, Munich, Germany
[3] Mem Sloan Kettering Canc Ctr, Dept Hlth Informat, 1275 York Ave, New York, NY 10021 USA
[4] Mem Sloan Kettering Canc Ctr, Dept Informat Syst, 1275 York Ave, New York, NY 10021 USA
[5] Mem Sloan Kettering Canc Ctr, Dept Epidemiol & Biostat, New York, NY 10021 USA
[6] Stanford Univ, Sch Med, Stanford, CA 94305 USA
[7] Mem Sloan Kettering Canc Ctr, Human Oncol & Pathogenesis Program, 1275 York Ave, New York, NY 10021 USA
[8] Icahn Sch Med Mt Sinai, Dept Pathol, New York, NY 10029 USA
基金
美国国家卫生研究院;
关键词
digital pathology; whole slide imaging; computational pathology; artificial intelligence; honest broker; pathology; WHOLE SLIDE IMAGES; LIGHT-MICROSCOPY; SURGICAL PATHOLOGY; VALIDATION; CONCORDANCE; PLATFORM; IMPLEMENTATION;
D O I
10.1093/jamia/ocab085
中图分类号
TP [自动化技术、计算机技术];
学科分类号
0812 ;
摘要
Objective: Broad adoption of digital pathology (DP) is still lacking, and examples for DP connecting diagnostic, research, and educational use cases are missing. We blueprint a holistic DP solution at a large academic medical center ubiquitously integrated into clinical workflows; researchapplications including molecular, genetic, and tissue databases; and educational processes. Materials and Methods: We built a vendor-agnostic, integrated viewer for reviewing, annotating, sharing, and quality assurance of digital slides in a clinical or research context. It is the first homegrown viewer cleared by New York State provisional approval in 2020 for primary diagnosis and remote sign-out during the COVID-19 (coronavirus disease 2019) pandemic. We further introduce an interconnected Honest Broker for BioInformatics Technology (HoBBIT) to systematically compile and share large-scale DP research datasets including anonymized images, redacted pathology reports, and clinical data of patients with consent. Results: The solution has been operationally used over 3 years by 926 pathologists and researchers evaluating 288 903 digital slides. A total of 51% of these were reviewed within 1 month after scanning. Seamless integration of the viewer into 4 hospital systems clearly increases the adoption of DP. HoBBIT directly impacts the translation of knowledge in pathology into effective new health measures, including artificial intelligence-driven detection models for prostate cancer, basal cell carcinoma, and breast cancer metastases, developed and validated on thousands of cases. Conclusions: We highlight major challenges and lessons learned when going digital to provide orientation for other pathologists. Building interconnected solutions will not only increase adoption of DP, but also facilitate next-generation computational pathology at scale for enhanced cancer research.
引用
收藏
页码:1874 / 1884
页数:11
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