Genome Sequence Resource for Nigrospora oryzae, an Important Pathogenic Fungus Threatening Crop Production

被引:8
|
作者
Wang, Yafei [1 ,2 ]
Yao, Jinai [3 ]
Li, Zhiqiang [2 ]
Huo, Jianfei [4 ]
Zhou, Shaoqun [1 ]
Liu, Wende [2 ]
Wu, Hanxiang [2 ]
机构
[1] Chinese Acad Agr Sci, Agr Genom Inst Shenzhen, Shenzhen Branch, Guangdong Lab Lingnan Modern Agr,Genome Anal Lab, Shenzhen 440307, Peoples R China
[2] Chinese Acad Agr Sci, Inst Plant Protect, State Key Lab Biol Plant Dis & Insect Pests, Beijing 100193, Peoples R China
[3] Fujian Acad Agr Sci, Fujian Key Lab Monitoring & Integrated Management, Inst Plant Protect, Fuzhou 350013, Peoples R China
[4] Tianjin Acad Agr Sci, Inst Plant Protect, Tianjin 300381, Peoples R China
关键词
genomics; Nigrospora oryzae; PacBio sequencing; pathogenesis; 1ST REPORT; LEAF-SPOT; IDENTIFICATION; EVOLUTION; COTTON; MODEL;
D O I
10.1094/MPMI-11-20-0311-A
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Nigrospora oryzae is an important phytopathogenic fungus with a broad host range. Here, we report an annotated draft of the genome of N. oryzae field strain GZL1 collected from maize assembled from PacBio and Illumina sequencing reads. The assembly we obtained has 15 scaffolds with an N-50 length of 4,037,616 bp. The resulting GZL1 draft genome is 43,214,190 bp, with GC content of 58.19%. The completeness of GZL1 genome assembly is 99.30%. This study is the first report of the genome sequence of N. oryzae, which can facilitate future study of the genetic variation and pathogenic mechanism of this important fungal pathogen.
引用
收藏
页码:835 / 838
页数:4
相关论文
共 50 条
  • [21] The First Complete Genome Resource for the Plant-Pathogenic Fungus Exobasidium rhododendri
    Li, Yao-Yao
    Liu, Fei
    Wang, Qi-Ming
    PHYTOPATHOLOGY, 2023, 113 (06) : 1133 - 1136
  • [22] Draft Genome Sequence of Amphirosellinia nigrospora JS']JS-1675, an Endophytic Fungus from Pteris cretica
    Jeon, Jongbum
    Park, Sook-Young
    Kim, Jung A.
    Yu, Nan Hee
    Park, Ae Ran
    Kim, Jin-Cheol
    Lee, Yong-Hwan
    Kim, Soonok
    MICROBIOLOGY RESOURCE ANNOUNCEMENTS, 2019, 8 (20):
  • [23] Draft Genome Sequence of Dactylonectria macrodidyma, a Plant-Pathogenic Fungus in the Nectriaceae
    Malapi-Wight, Martha
    Salgado-Salazar, Catalina
    Demers, Jill
    Veltri, Daniel
    Crouch, Jo Anne
    GENOME ANNOUNCEMENTS, 2015, 3 (02)
  • [24] Whole-genome sequence of Arthrinium phaeospermum, a globally distributed pathogenic fungus
    Li, Shujiang
    Tang, Yaowen
    Fang, Xinmei
    Qiao, Tianmin
    Han, Shan
    Zhu, Tianhui
    GENOMICS, 2020, 112 (01) : 919 - 929
  • [25] A Genome Sequence Resource of Nigrospora sphaerica Causing Fruit Dried-Shrink Disease in Akebia trifoliata
    Hong, Xiujing
    Huang, Shengxiong
    Liu, Yongsheng
    PLANT DISEASE, 2022, 106 (02) : 745 - 747
  • [26] Complete genome sequence of a novel mitovirus from the phytopathogenic fungus Rhizoctonia oryzae-sativae
    Abdoulaye, Assane Hamidou
    Cheng, Jiasen
    Fu, Yanping
    Jiang, Daohong
    Xie, Jiatao
    ARCHIVES OF VIROLOGY, 2017, 162 (05) : 1409 - 1412
  • [27] Complete genome sequence of a novel mitovirus from the phytopathogenic fungus Rhizoctonia oryzae-sativae
    Assane Hamidou Abdoulaye
    Jiasen Cheng
    Yanping Fu
    Daohong Jiang
    Jiatao Xie
    Archives of Virology, 2017, 162 : 1409 - 1412
  • [28] Genome Sequence Resource of an Avirulent Magnaporthe oryzae Field Strain AM16
    Wang, Xingli
    Xiao, Qian
    Xu, Yan
    Meng, Li
    Chen, Yali
    Lu, Daihua
    Luo, Qiong
    PLANT DISEASE, 2022, 106 (08) : 2243 - 2246
  • [29] First Draft Genome Sequence of the Pathogenic Fungus Lomentospora prolificans (Formerly Scedosporium prolificans)
    Luo, Ruibang
    Zimin, Aleksey
    Workman, Rachael
    Fan, Yunfan
    Pertea, Geo
    Grossman, Nina
    Wear, Maggie P.
    Jia, Bei
    Miller, Heather
    Casadevall, Arturo
    Timp, Winston
    Zhang, Sean X.
    Salzberg, Steven L.
    G3-GENES GENOMES GENETICS, 2017, 7 (11): : 3831 - 3836
  • [30] Genome sequence of the insect pathogenic fungus Cordyceps militaris, a valued traditional chinese medicine
    Peng Zheng
    Yongliang Xia
    Guohua Xiao
    Chenghui Xiong
    Xiao Hu
    Siwei Zhang
    Huajun Zheng
    Yin Huang
    Yan Zhou
    Shengyue Wang
    Guo-Ping Zhao
    Xingzhong Liu
    Raymond J St Leger
    Chengshu Wang
    Genome Biology, 12