Multi-task longitudinal forecasting with missing values on Alzheimer's disease

被引:2
|
作者
Sevilla-Salcedo, Carlos [1 ]
Imani, Vandad [2 ]
Gomez-Verdejo, Vanessa [1 ]
Tohka, Jussi [1 ]
机构
[1] Univ Carlos III Madrid, Signal Theory & Commun Dept, Leganes 28911, Spain
[2] Univ Eastern Finland, AI Virtanen Inst Mol Sci, Kuopio, Finland
基金
加拿大健康研究院; 欧盟地平线“2020”; 美国国家卫生研究院; 芬兰科学院;
关键词
Alzheimer?s disease; Longitudinal data; Missing values; Multi-task; ASSESSMENT SCALE; ADAS-COG; PROGRESSION; DEMENTIA;
D O I
10.1016/j.cmpb.2022.107056
中图分类号
TP39 [计算机的应用];
学科分类号
081203 ; 0835 ;
摘要
Background and Objective: Machine learning techniques typically used in dementia assessment are not able to learn multiple tasks jointly and deal with time-dependent heterogeneous data containing missing values. In this paper, we reformulate SSHIBA, a recently introduced Bayesian multi-view latent variable model, for jointly learning diagnosis, ventricle volume, and ADAS score in dementia on longitudinal data with missing values Methods: We propose a novel Bayesian Variational inference framework capable of simultaneously imput-ing missing values and combining information from several views. This way, we can combine different data views from different time-points in a common latent space and learn the relationships between each time-point, using the semi-supervised formulation to fully exploit the temporal structure of the data and handle missing values. In turn, the model can combine all the available information to simultaneously model and predict multiple output variables.Results: We applied the proposed model to jointly predict diagnosis, ventricle volume, and ADAS score in dementia. The comparison of imputation strategies demonstrated the superior performance of the semi -supervised formulation of the model, improving the best baseline methods. Moreover, the performance in simultaneous prediction of diagnosis, ventricle volume, and ADAS score led to an improved prediction performance over the best baseline method. Conclusions: The results demonstrate that the proposed SSHIBA framework can learn an excellent im-putation of the missing values and outperforming the baselines while simultaneously predicting three different tasks.(c) 2022 Elsevier B.V. All rights reserved.
引用
收藏
页数:11
相关论文
共 50 条
  • [31] Identify Biomarkers of Alzheimer's Disease Based on Multi-task Canonical Correlation Analysis and Regression Model
    Shuaiqun Wang
    Huiqiu Chen
    Wei Kong
    Fengchun Ke
    Kai Wei
    Journal of Molecular Neuroscience, 2022, 72 : 1749 - 1763
  • [32] Feature-aware Multi-task feature learning for Predicting Cognitive Outcomes in Alzheimer's disease
    Cao, Peng
    Tang, Shanshan
    Huang, Min
    Yang, Jinzhu
    Zhao, Dazhe
    Trabelsi, Amine
    Zaiane, Osmar
    2019 IEEE INTERNATIONAL CONFERENCE ON BIOINFORMATICS AND BIOMEDICINE (BIBM), 2019,
  • [33] Joint High-Order Multi-Task Feature Learning to Predict the Progression of Alzheimer's Disease
    Brand, Lodewijk
    Wang, Hua
    Huang, Heng
    Risacher, Shannon
    Saykin, Andrew
    Shen, Li
    MEDICAL IMAGE COMPUTING AND COMPUTER ASSISTED INTERVENTION - MICCAI 2018, PT I, 2018, 11070 : 555 - 562
  • [34] Identify Biomarkers of Alzheimer's Disease Based on Multi-task Canonical Correlation Analysis and Regression Model
    Wang, Shuaiqun
    Chen, Huiqiu
    Kong, Wei
    Ke, Fengchun
    Wei, Kai
    JOURNAL OF MOLECULAR NEUROSCIENCE, 2022, 72 (08) : 1749 - 1763
  • [35] A new deep belief network-based multi-task learning for diagnosis of Alzheimer’s disease
    Nianyin Zeng
    Han Li
    Yonghong Peng
    Neural Computing and Applications, 2023, 35 : 11599 - 11610
  • [36] A new deep belief network-based multi-task learning for diagnosis of Alzheimer's disease
    Zeng, Nianyin
    Li, Han
    Peng, Yonghong
    NEURAL COMPUTING & APPLICATIONS, 2023, 35 (16): : 11599 - 11610
  • [37] Adaptive Multi-Task Dual-Structured Learning with Its Application on Alzheimer's Disease Study
    Hao, Shijie
    Chen, Tao
    Wang, Yang
    Guo, Yanrong
    Wang, Meng
    ACM TRANSACTIONS ON INTERNET TECHNOLOGY, 2021, 21 (02)
  • [38] Multi-modal multi-task learning for joint prediction of multiple regression and classification variables in Alzheimer's disease
    Zhang, Daoqiang
    Shen, Dinggang
    NEUROIMAGE, 2012, 59 (02) : 895 - 907
  • [39] Joint Classification and Regression via Deep Multi-Task Multi-Channel Learning for Alzheimer's Disease Diagnosis
    Liu, Mingxia
    Zhang, Jun
    Adeli, Ehsan
    Shen, Dinggang
    IEEE TRANSACTIONS ON BIOMEDICAL ENGINEERING, 2019, 66 (05) : 1195 - 1206
  • [40] Multi-stage Diagnosis of Alzheimer's Disease with Incomplete Multimodal Data via Multi-task Deep Learning
    Thung, Kim-Han
    Yap, Pew-Thian
    Shen, Dinggang
    DEEP LEARNING IN MEDICAL IMAGE ANALYSIS AND MULTIMODAL LEARNING FOR CLINICAL DECISION SUPPORT, 2017, 10553 : 160 - 168