MetaNetter: inference and visualization of high-resolution metabolomic networks

被引：50

作者：

Jourdan, Fabien ^{[1
]}

Breitling, Rainer ^{[2
,3
]}

Barrett, Michael P. ^{[4
]}

Gilbert, David ^{[5
]}

机构：

[1] INRA, ENVT, UMR Xenobiot 1089, F-31931 Toulouse, France

[2] Univ Groningen, Groningen Bioinformat Ctr, NL-9751 NN Haren, Netherlands

[3] Univ Glasgow, Groningen Bioinformat Ctr, Glasgow G12 8QQ, Lanark, Scotland

[4] Univ Glasgow, Inst Biomed & Life Sci, Glasgow G12 8QQ, Lanark, Scotland

[5] Univ Glasgow, Bioinformat Res Ctr, Glasgow G12 8QQ, Lanark, Scotland

来源：

BIOINFORMATICS | 2008年 / 24卷 / 01期

关键词：

D O I：

10.1093/bioinformatics/btm536

中图分类号：

Q5 [生物化学];

学科分类号：

071010 ; 081704 ;

摘要：

We present a Cytoscape plugin for the inference and visualization of networks from high-resolution mass spectrometry metabolomic data. The software also provides access to basic topological analysis. This open source, multi-platform software has been successfully used to interpret metabolomic experiments and will enable others using filtered, high mass accuracy mass spectrometric data sets to build and analyse networks. Supplementary information: http://compbio.dcs.gla.ac.uk/fabien/abinitio/doc/Supplementary. pdf.

引用

页码：143 / 145

页数：3

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