Portal Stability Controls Dynamics of DNA Ejection from Phage

被引:5
|
作者
Freeman, Krista G. [1 ]
Behrens, Manja A. [2 ]
Streletzky, Kiril A. [3 ]
Olsson, Ulf [2 ]
Evilevitch, Alex [1 ,4 ]
机构
[1] Carnegie Mellon Univ, Dept Phys, Pittsburgh, PA 15213 USA
[2] Lund Univ, Div Phys Chem, Lund, Sweden
[3] Cleveland State Univ, Dept Phys, Cleveland, OH 44115 USA
[4] Lund Univ, Div Biochem & Struct Biol, Lund, Sweden
来源
JOURNAL OF PHYSICAL CHEMISTRY B | 2016年 / 120卷 / 26期
基金
美国国家科学基金会; 瑞典研究理事会;
关键词
BACTERIOPHAGE-LAMBDA; ESCHERICHIA-COLI; COLIPHAGE-LAMBDA; RECEPTOR PROTEIN; SELF-DIFFUSION; LIFE-HISTORY; IN-VITRO; PRESSURE; VIRUSES; FORCES;
D O I
10.1021/acs.jpcb.6b04172
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
Through a unique combination of time-resolved single-molecule (cryo-TEM) and bulk measurements (light scattering and small-angle X-ray scattering), we provide a detailed study of the dynamics of stochastic DNA ejection events from phage A. We reveal that both binding with the specific phage receptor, LamB, and thermo-mechanical destabilization of the portal vertex on the capsid are required for initiation of ejection of the pressurized lambda-DNA from the phage. Specifically, we found that a measurable activation energy barrier for initiation of DNA ejection with LamB present, E-a = (1.2 +/- 0.1) x 10(-19) J/phage (corresponding to similar to 28 kT(body)/phage at T-body = 37 degrees C), results in 15 times increased rate of ejection event dynamics when the temperature is raised from 15 to 45 degrees C (7.5 min versus 30 s average lag time for initiation of ejection). This suggests that phages have a double fail-safe mechanism for ejection in addition to receptor binding, phage must also overcome (through thermal energy and internal DNA pressure) an energy barrier for DNA ejection. This energy barrier ensures that viral genome ejection into cells occurs with high efficiency only when the temperature conditions are favorable for genome replication. At lower suboptimal temperatures, the infectious phage titer is preserved over much longer times, since DNA ejection dynamics is strongly inhibited even in the presence of solubilized receptor or susceptible cells. This work also establishes a light scattering based approach to investigate the influence of external solution conditions, mimicking those of the bacterial cytoplasm, on the stability of the viral capsid portal, which is directly linked to dynamics of virion deactivation.
引用
收藏
页码:6421 / 6429
页数:9
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