Machine learning in resting-state fMRI analysis

被引:118
|
作者
Khosla, Meenakshi [1 ]
Jamison, Keith [2 ]
Ngo, Gia H. [1 ]
Kuceyeski, Amy [2 ,3 ]
Sabuncu, Mert R. [1 ,4 ]
机构
[1] Cornell Univ, Sch Elect & Comp Engn, 300 Frank HT Rhodes Hall, Ithaca, NY 14853 USA
[2] Weill Cornell Med Coll, Radiol, New York, NY USA
[3] Weill Cornell Med Coll, Brain & Mind Res Inst, New York, NY USA
[4] Cornell Univ, Nancy E & Peter C Meinig Sch Biomed Engn, Ithaca, NY 14853 USA
关键词
Machine learning; Resting-state; Functional MRI; Intrinsic networks; Brain connectivity; FUNCTIONAL CONNECTIVITY PATTERNS; INDEPENDENT COMPONENT ANALYSIS; BRAIN CONNECTIVITY; ALZHEIMERS-DISEASE; MAJOR DEPRESSION; DYNAMIC CONNECTIVITY; SUSTAINED ATTENTION; SLEEP-DEPRIVATION; CEREBRAL-CORTEX; NETWORKS;
D O I
10.1016/j.mri.2019.05.031
中图分类号
R8 [特种医学]; R445 [影像诊断学];
学科分类号
1002 ; 100207 ; 1009 ;
摘要
Machine learning techniques have gained prominence for the analysis of resting-state functional Magnetic Resonance Imaging (rs-fMRI) data. Here, we present an overview of various unsupervised and supervised machine learning applications to rs-fMRI. We offer a methodical taxonomy of machine learning methods in restingstate fMRI. We identify three major divisions of unsupervised learning methods with regard to their applications to rs-fMRI, based on whether they discover principal modes of variation across space, time or population. Next, we survey the algorithms and rs-fMRI feature representations that have driven the success of supervised subjectlevel predictions. The goal is to provide a high-level overview of the burgeoning field of rs-fMRI from the perspective of machine learning applications.
引用
收藏
页码:101 / 121
页数:21
相关论文
共 50 条
  • [1] On the generalizability of resting-state fMRI machine learning classifiers
    Huf, Wolfgang
    Kalcher, Klaudius
    Boubela, Roland N.
    Rath, Georg
    Vecsei, Andreas
    Filzmoser, Peter
    Moser, Ewald
    [J]. FRONTIERS IN HUMAN NEUROSCIENCE, 2014, 8
  • [2] Spatially regularized machine learning for task and resting-state fMRI
    Song, Xiaomu
    Panych, Lawrence P.
    Chen, Nan-Kuei
    [J]. JOURNAL OF NEUROSCIENCE METHODS, 2016, 257 : 214 - 228
  • [3] Sparse dictionary learning for resting-state fMRI analysis
    Lee, Kangjoo
    Han, Paul Kyu
    Ye, Jong Chul
    [J]. WAVELETS AND SPARSITY XIV, 2011, 8138
  • [4] Deep learning in resting-state fMRI
    Abrol, Anees
    Hassanzadeh, Reihaneh
    Plis, Sergey
    Calhoun, Vince
    [J]. 2021 43RD ANNUAL INTERNATIONAL CONFERENCE OF THE IEEE ENGINEERING IN MEDICINE & BIOLOGY SOCIETY (EMBC), 2021, : 3965 - 3969
  • [5] Exploring memory function in earthquake trauma survivors with resting-state fMRI and machine learning
    Yuchen Li
    Hongru Zhu
    Zhengjia Ren
    Su Lui
    Minlan Yuan
    Qiyong Gong
    Cui Yuan
    Meng Gao
    Changjian Qiu
    Wei Zhang
    [J]. BMC Psychiatry, 20
  • [6] A MACHINE LEARNING MODEL TO PREDICT SEIZURE SUSCEPTIBILITY FROM RESTING-STATE FMRI CONNECTIVITY
    Garner, Rachael
    La Rocca, Marianna
    Barisano, Giuseppe
    Toga, Arthur W.
    Duncan, Dominique
    Vespa, Paul
    [J]. 2019 SPRING SIMULATION CONFERENCE (SPRINGSIM), 2019,
  • [7] Exploring memory function in earthquake trauma survivors with resting-state fMRI and machine learning
    Li, Yuchen
    Zhu, Hongru
    Ren, Zhengjia
    Lui, Su
    Yuan, Minlan
    Gong, Qiyong
    Yuan, Cui
    Gao, Meng
    Qiu, Changjian
    Zhang, Wei
    [J]. BMC PSYCHIATRY, 2020, 20 (01)
  • [8] Classification of fMRI Resting-State Maps using Machine Learning Techniques: a Comparative Study
    Gallos, Ioannis
    Siettos, Constantinos
    [J]. PROCEEDINGS OF THE INTERNATIONAL CONFERENCE OF COMPUTATIONAL METHODS IN SCIENCES AND ENGINEERING 2017 (ICCMSE-2017), 2017, 1906
  • [9] A Machine Learning Approach for Diagnosing Neurological Disorders using Longitudinal Resting-State fMRI
    Devika, K.
    Oruganti, V. Ramana Murthy
    [J]. 2021 11TH INTERNATIONAL CONFERENCE ON CLOUD COMPUTING, DATA SCIENCE & ENGINEERING (CONFLUENCE 2021), 2021, : 494 - 499
  • [10] Resting-state fMRI for the masses
    Orringer, Daniel A.
    [J]. JOURNAL OF NEUROSURGERY, 2019, 131 (03) : 757 - 758