Significance of Parkinson Family Genes in the Prognosis and Treatment Outcome Prediction for Lung Adenocarcinoma

被引:1
|
作者
Li, Yanqi [1 ]
Lu, Xiao [1 ]
Zhang, Jiao [1 ]
Liu, Quanxing [1 ]
Zhou, Dong [1 ]
Deng, Xufeng [1 ]
Qiu, Yuan [2 ]
Chen, Qian [3 ]
Li, Manyuan [1 ]
Yang, Guixue [1 ]
Zheng, Hong [1 ]
Dai, Jigang [1 ]
机构
[1] Army Med Univ, Xinqiao Hosp, Dept Thorac Surg, Mil Med Univ 2, Chongqing, Peoples R China
[2] Army Med Univ, Xinqiao Hosp, Dept Gen Surg, Mil Med Univ 2, Chongqing, Peoples R China
[3] Third Mil Med Univ, Canc Ctr, Daping Hosp, Army Med Univ, Chongqing, Peoples R China
基金
中国国家自然科学基金;
关键词
Parkinson gene family; LUAD; prognosis; tumour mutation burden; neoantigen; immunotherapy; POOR-PROGNOSIS; BREAST-CANCER; DISEASE; EXPRESSION; CHCHD2; FEATURES; PATHWAY; PEOPLE;
D O I
10.3389/fmolb.2021.735263
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Epidemiological investigations have shown that patients with Parkinson's disease (PD) have a lower probability of developing lung cancer. Subsequent research revealed that PD and lung cancer share specific genetic alterations. Therefore, the utilisation of PD biomarkers and therapeutic targets may improve lung adenocarcinoma (LUAD) diagnosis and treatment. We aimed to identify a gene-based signature from 25 Parkinson family genes for LUAD prognosis and treatment choice. We analysed Parkinson family gene expression and protein levels in LUAD, utilising multiple databases. Least absolute shrinkage and selection operator (LASSO) regression was used to construct a prognostic model based on the TCGA-LUAD cohort. We validated the model in external GEO cohorts. Immune cell infiltration was compared between risk groups, and GEO data was used to explore the model's predictive ability for LUAD treatment response. Nearly all Parkinson family genes exhibited significant differential expression between LUAD and normal tissues. LASSO regression confirmed that our seven Parkinson family gene-based signature had excellent prognostic performance for LUAD, as validated in three GEO cohorts. The high-risk group was clearly associated with low tumour immune cell infiltration, suggesting that immunotherapy may not be an optimal treatment choice. This is the first Parkinson family gene-based model for the prediction of LUAD prognosis and treatment outcome. The association of these genes with poor prognosis and low immune infiltration requires further investigation.
引用
收藏
页数:14
相关论文
共 50 条
  • [21] DNA methylation molecular subtypes for prognosis prediction in lung adenocarcinoma
    Xu, Duoduo
    Li, Cheng
    Zhang, Youjing
    Zhang, Jizhou
    BMC PULMONARY MEDICINE, 2022, 22 (01)
  • [22] Identification of mutational signature for lung adenocarcinoma prognosis and immunotherapy prediction
    Sainan Zhang
    Mengyue Li
    Yilong Tan
    Juxuan Zhang
    Yixin Liu
    Wenbin Jiang
    Xin Li
    Haitao Qi
    Lefan Tang
    Ran Ji
    Wenyuan Zhao
    Yunyan Gu
    Lishuang Qi
    Journal of Molecular Medicine, 2022, 100 : 1755 - 1769
  • [23] DNA methylation molecular subtypes for prognosis prediction in lung adenocarcinoma
    Duoduo Xu
    Cheng Li
    Youjing Zhang
    Jizhou Zhang
    BMC Pulmonary Medicine, 22
  • [24] Identification of mutational signature for lung adenocarcinoma prognosis and immunotherapy prediction
    Zhang, Sainan
    Li, Mengyue
    Tan, Yilong
    Zhang, Juxuan
    Liu, Yixin
    Jiang, Wenbin
    Li, Xin
    Qi, Haitao
    Tang, Lefan
    Ji, Ran
    Zhao, Wenyuan
    Gu, Yunyan
    Qi, Lishuang
    JOURNAL OF MOLECULAR MEDICINE-JMM, 2022, 100 (12): : 1755 - 1769
  • [25] Significance of LRFN4 in prognosis and tumor microenvironment of lung adenocarcinoma
    Wang, Nana
    Cao, Shuming
    Tan, Xiaofeng
    Liu, Meirong
    FRONTIERS IN PHARMACOLOGY, 2025, 16
  • [26] Comprehensively Analyze the Prognosis Significance and Immune Implication of PTPRO in Lung Adenocarcinoma
    Lin, Zhimin
    Zhang, Jinjun
    Liu, Biqiong
    Hong, Zhiqian
    Chen, Zengguang
    Huang, Xiaoyan
    MEDIATORS OF INFLAMMATION, 2023, 2023
  • [27] Proliferation genes in lung development associated with the prognosis of lung adenocarcinoma but not squamous cell carcinoma
    Li, Ping
    Zhang, Lei
    Yu, Xuexin
    Tong, Run
    Di, Xuebing
    Mao, Yousheng
    Gao, Yanning
    Zhang, Kaitai
    Feng, Lin
    Cheng, Shujun
    CANCER SCIENCE, 2018, 109 (02): : 308 - 316
  • [28] Key microRNAs and hub genes associated with poor prognosis in lung adenocarcinoma
    Ye, Guan-Chao
    Liu, Ya-Fei
    Huang, Lan
    Zhang, Chun-Yang
    Sheng, Yin-Liang
    Wu, Bin
    Han, Lu
    Wu, Chun-Li
    Dong, Bo
    Qi, Yu
    AGING-US, 2021, 13 (03): : 3742 - 3762
  • [29] Molecular Characterization and Prognosis of Lactate-Related Genes in Lung Adenocarcinoma
    Guo, Zixin
    Hu, Liwen
    Wang, Qingwen
    Wang, Yujin
    Liu, Xiao-Ping
    Chen, Chen
    Li, Sheng
    Hu, Weidong
    CURRENT ONCOLOGY, 2023, 30 (03) : 2845 - 2861
  • [30] Acute lung injury: significance, treatment and outcome
    Allen, Gilman B.
    Parsons, Polly
    CURRENT OPINION IN ANESTHESIOLOGY, 2005, 18 (02) : 209 - 215