Whole-exome sequencing identified compound heterozygous variants in MMKS in a Chinese pedigree with Bardet-Biedl syndrome

被引:12
|
作者
Qi, Zhan [1 ]
Shen, Ying [2 ,3 ]
Fu, Qian [2 ,3 ]
Li, Wei [1 ]
Yang, Wei [1 ]
Xu, Wenshan [1 ]
Chu, Ping [4 ,5 ,6 ]
Zhang, Yaxin [7 ]
Wang, Hui [2 ,3 ]
机构
[1] Capital Med Univ, Natl Ctr Childrens Hlth,Beijing Childrens Hosp, Beijing Key Lab Genet Birth Defects,Beijing Pedia, Key Lab Major Dis Children,Minist Educ,Ctr Med Ge, Beijing 100045, Peoples R China
[2] Capital Med Univ, Beijing Key Lab Chron Renal Dis & Blood Purificat, Key Lab Major Dis Children, Minist Educ,Natl Ctr Childrens Hlth, Beijing 100045, Peoples R China
[3] Capital Med Univ, Nephrol Dept, Beijing Childrens Hosp, Natl Ctr Childrens Hlth, Beijing 100045, Peoples R China
[4] Capital Med Univ, Beijing Key Lab Pediat Dis Otolaryngol Head & Nec, Key Lab Major Dis Children, Minist Educ,Natl Ctr Childrens Hlth, Beijing 100045, Peoples R China
[5] Capital Med Univ, Natl Ctr Childrens Hlth, Beijing Pediat Res Inst, Beijing 100045, Peoples R China
[6] Capital Med Univ, Natl Ctr Childrens Hlth, Beijing Childrens Hosp, Beijing 100045, Peoples R China
[7] Capital Med Univ, Sch Pediat, Beijing 100069, Peoples R China
关键词
Bardet-Biedl syndrome; MKKS; BBS6; NPHP1; whole-exome sequencing; CHAPERONIN-LIKE PROTEIN; BBS LOCUS; MUTATIONS; GENOMICS; CILIA; GENE; CILIOPATHY; DIAGNOSIS; DISORDER; MICE;
D O I
10.1007/s11427-017-9085-7
中图分类号
Q [生物科学];
学科分类号
07 ; 0710 ; 09 ;
摘要
Bardet-Biedl syndrome (BBS) is a genetically heterogeneous disorder characterized by retinal dystrophy, polydactyly, obesity, developmental delay, and renal defects. At least 21 candidate BBS-associated genes (BBS1-19, NPHP1, and IFT172) have previously been identified, and all of them play important roles in ciliary function. Here, we collected a BBS pedigree with four members and performed whole-exome sequencing on the proband. The variants were analyzed and evaluated to confirm their pathogenicity. We found compound heterozygous variants (c.1192C > T, p.Q398* and c.1175C > T, p.T392M) in MKKS in both the siblings, and these were likely to be pathogenic variants. We also found a missense variant (c.2029G > C, p.E677Q) in NPHP1 and a missense variant (c.2470C > T, p.R824C) in BBS9 in the proband only, which are variants of uncertain significance. The compound heterozygous variants were probably responsible for the BBS phenotype in this Chinese pedigree and the missense mutations in NPHP1 and BBS9 might contribute to the mutation load.
引用
收藏
页码:739 / 745
页数:7
相关论文
共 50 条
  • [21] Comprehensive Molecular Diagnosis of Bardet-Biedl Syndrome by High-Throughput Targeted Exome Sequencing
    Xing, Dong-Jun
    Zhang, Hong-Xing
    Huang, Na
    Wu, Kun-Chao
    Huang, Xiu-Feng
    Huang, Fang
    Tong, Yi
    Pang, Chi-Pui
    Qu, Jia
    Jin, Zi-Bing
    PLOS ONE, 2014, 9 (03):
  • [22] Exome Sequencing of 21 Bardet-Biedl Syndrome (BBS) Genes to Identify Obesity Variants in 6,851 American Indians
    Day, Samantha E.
    Muller, Yunhua L.
    Koroglu, Cigdem
    Kobes, Sayuko
    Wiedrich, Kim
    Mahkee, Darin
    Kim, Hye In
    Van Hout, Cris
    Gosalia, Nehal
    Ye, Bin
    Shuldiner, Alan R.
    Knowler, William C.
    Hanson, Robert L.
    Bogardus, Clifton
    Baier, Leslie J.
    OBESITY, 2021, 29 (04) : 748 - 754
  • [23] "NPFFR2 gene compound heterozygous variants associated with preeclampsia identified by whole-exome sequencing" (vol 854, 147108, 2023)
    Jiang, Huling
    Wang, Luming
    Ping, Zepeng
    Zhu, Jianjun
    GENE, 2023, 889
  • [24] Pathogenic variants identified using whole-exome sequencing in Chinese patients with primary ciliary dyskinesia
    Ye, Yutian
    Huang, Qijun
    Chen, Lipeng
    Yuan, Fang
    Liu, Shengguo
    Zhang, Xiangxia
    Chen, Rongchang
    Fu, Yingyun
    Yue, Yongjian
    AMERICAN JOURNAL OF MEDICAL GENETICS PART A, 2022, 188 (10) : 3024 - 3031
  • [25] Whole-exome sequencing identifies compound heterozygous mutations in ARSA of two siblings presented with atypical onset of metachromatic leukodystrophy from a Chinese pedigree
    Wang, Zhihong
    Lin, Yanhong
    Zheng, Dezhu
    Yan, Aizhen
    Tu, Xiangdong
    Lin, Juan
    Lan, Fenghua
    CLINICA CHIMICA ACTA, 2016, 460 : 135 - 137
  • [26] Pathogenic variants identified by whole-exome sequencing in 43 patients with epilepsy
    Zhang, Linlin
    Gao, Jinshuang
    Liu, Hailiang
    Tian, Yuan
    Zhang, Xiaoli
    Lei, Wei
    Li, Ying
    Guo, Yaqing
    Yu, Haiyang
    Yuan, Erfeng
    Liang, Lisi
    Cui, Shihong
    Zhang, Xiaoan
    HUMAN GENOMICS, 2020, 14 (01)
  • [27] Pathogenic variants identified by whole-exome sequencing in 43 patients with epilepsy
    Linlin Zhang
    Jinshuang Gao
    Hailiang Liu
    Yuan Tian
    Xiaoli Zhang
    Wei Lei
    Ying Li
    Yaqing Guo
    Haiyang Yu
    Erfeng Yuan
    Lisi Liang
    Shihong Cui
    Xiaoan Zhang
    Human Genomics, 14
  • [28] Bardet-Biedl syndrome in two unrelated patients with identical compound heterozygous SCLT1 mutations
    Morisada, Naoya
    Hamada, Riku
    Miura, Kenichiro
    Ye, Ming Juan
    Nozu, Kandai
    Hattori, Motoshi
    Iijima, Kazumoto
    CEN CASE REPORTS, 2020, 9 (03) : 260 - 265
  • [29] Identification of Compound Heterozygous Mutations in the BBS7 Gene in a Korean Family with Bardet-Biedl Syndrome
    Shin, Seok Joon
    Kim, Myungshin
    Chae, Hyojin
    Kwon, Ahlm
    Kim, Yonggoo
    Kim, Sung Jun
    Yoon, Hye Eun
    Jekarl, Dong Wook
    Lee, Seungok
    ANNALS OF LABORATORY MEDICINE, 2015, 35 (01) : 181 - 184
  • [30] Novel compound heterozygous mutations in the OTOF Gene identified by whole-exome sequencing in auditory neuropathy spectrum disorder
    Tang, Fengzhu
    Ma, Dengke
    Wang, Yulan
    Qiu, Yuecai
    Liu, Fei
    Wang, Qingqing
    Lu, Qiutian
    Shi, Min
    Xu, Liang
    Liu, Min
    Liang, Jianping
    BMC MEDICAL GENETICS, 2017, 18 : 35