The complete chloroplast genome of Limonium tetragonum (Plumbaginaceae) isolated in Korea

被引:4
|
作者
Kim, Yongsung [1 ]
Xi, Hong [2 ,3 ]
Park, Jongsun [2 ,3 ]
机构
[1] Honam Natl Inst Biol Resources, Mokpo 58762, South Korea
[2] InfoBoss Inc, Seoul 06278, South Korea
[3] InfoBoss Res Ctr, Seoul 06278, South Korea
来源
KOREAN JOURNAL OF PLANT TAXONOMY | 2021年 / 51卷 / 03期
关键词
Limonium tetragonum; chloroplast genome; phylogenetic analysis; intraspecific variation; Plumbaginaceae; SEQUENCE; ALIGNMENT; LIVER;
D O I
10.11110/kjpt.2021.51.3.337
中图分类号
Q94 [植物学];
学科分类号
071001 ;
摘要
The chloroplast genome of Limonium tetragonum (Thunb.) Bullock, a halophytic species, was sequenced to understand genetic differences based on its geographical distribution. The cp genome of L. tetragonum was 154,689 bp long (GC ratio is 37.0%) and has four subregions: 84,572 bp of large single-copy (35.3%) and 12,813 bp of small singlecopy (31.5%) regions were separated by 28,562 bp of inverted repeat (40.9%) regions. It contained 128 genes (83 proteincoding genes, eight rRNAs, and 37 tRNAs). Thirty-five single-nucleotide polymorphisms and 33 INDEL regions (88 bp in length) were identified. Maximum-likelihood and Bayesian inference phylogenetic trees showed that L. tetragonum formed a sister group with L. aureum, which is incongruent with certain previous studies, including a phylogenetic analysis.
引用
收藏
页码:337 / 344
页数:8
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