Diffusion-limited reactions in dynamic heterogeneous media

被引:116
|
作者
Lanoiselee, Yann [1 ]
Moutal, Nicolas [1 ]
Grebenkov, Denis S. [1 ]
机构
[1] Univ Paris Saclay, Lab Phys Matiere Condensee UMR 7643, CNRS, Ecole Polytech, F-91128 Palaiseau, France
来源
NATURE COMMUNICATIONS | 2018年 / 9卷
关键词
ANOMALOUS DIFFUSION; RANDOM-WALKS; MODELS; KINETICS; STATISTICS; MOLECULE; ESCAPE; TIME;
D O I
10.1038/s41467-018-06610-6
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
Most biochemical reactions in living cells rely on diffusive search for target molecules or regions in a heterogeneous overcrowded cytoplasmic medium. Rapid rearrangements of the medium constantly change the effective diffusivity felt locally by a diffusing particle and thus impact the distribution of the first-passage time to a reaction event. Here, we investigate the effect of these dynamic spatiotemporal heterogeneities onto diffusion-limited reactions. We describe a general mathematical framework to translate many results for ordinary homogeneous Brownian motion to heterogeneous diffusion. In particular, we derive the probability density of the first-passage time to a reaction event and show how the dynamic disorder broadens the distribution and increases the likelihood of both short and long trajectories to reactive targets. While the disorder slows down reaction kinetics on average, its dynamic character is beneficial for a faster search and realization of an individual reaction event triggered by a single molecule.
引用
收藏
页数:16
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