Molecular phylogenetic analysis of new Entoloma rhodopolium-related species in Japan and its identification method using PCR-RFLP

被引:10
|
作者
Kondo, Kazunari [1 ]
Nakamura, Kosuke [1 ]
Ishigaki, Takumi [1 ]
Sakata, Kozue [1 ]
Obitsu, Saemi [1 ]
Noguchi, Akio [1 ]
Fukuda, Nozomi [1 ]
Nagasawa, Eiji [2 ]
Teshima, Reiko [3 ]
Nishimaki-Mogami, Tomoko [1 ]
机构
[1] Natl Inst Hlth Sci, Div Biochem, Kawasaki Ku, 3-25-26 Tonomachi, Kawasaki, Kanagawa 2109501, Japan
[2] Tottori Mycol Inst, 211 Kokoge, Tottori 6891125, Japan
[3] Pharmaceut & Med Devices Agcy, Chiyoda Ku, 3-3-2 Kasumigaseki, Tokyo 1000013, Japan
来源
SCIENTIFIC REPORTS | 2017年 / 7卷
关键词
GENUS ENTOLOMA; AGARICALES; TASMANIA;
D O I
10.1038/s41598-017-14466-x
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
Poisonous Entoloma rhodopolium and other similar species including edible E. sarcopum are morphologically diverse. People mistake poisonous species for edible species. Classification and the detection method of these species need to be defined. The morphological and phylogenetic studies have been reported in northern Europe. In Japan, the genetic study remains unsolved. Thus, phylogenetic analysis of E. rhodopolium was conducted using ITS and RPB2 sequences, and the result was compared with that of European species. Japanese E. rhodopolium was classified into three clades, none of which belonged to the true European E. rhodopolium and other known species. Three species were defined as new species. Entoloma rhodopolium clade-I (named E. lacus) was genetically close to but morphologically separated from E. majaloides. Clade-II (E. subrhodopolium) was classified to the same group as E. sinuatum and E. subsinuatum, but distinct from these species. Clade-III was segregated from known Entoloma species including E. lupinum, and named E. pseudorhodopolium. Based on the classification, a simple identification method PCR-RFLP was developed to discriminate between poisonous species and edible E. sarcopum, which is very similar in morphology. The study can help to clarify the taxonomy of complex E. rhodopolium-related species, and to prevent food poisoning.
引用
收藏
页数:12
相关论文
共 50 条
  • [21] Application of PCR-RFLP analysis on species identification of canned tuna
    Lin, Wen-Feng
    Hwang, Deng-Fwu
    FOOD CONTROL, 2007, 18 (09) : 1050 - 1057
  • [22] Identification of Armillaria species in Japan using PCR-RFLP analysis of rDNA intergenic spacer region and comparisons of Armillaria species in the world
    Matsushita, N
    Suzuki, K
    JOURNAL OF FOREST RESEARCH, 2005, 10 (03) : 173 - 179
  • [23] An Efficient PCR-RFLP Method for the Rapid Identification of Korean Pyropia Species
    Kim, Yonguk
    Choi, Sung-Je
    Choi, Chulyung
    MOLECULES, 2017, 22 (12):
  • [24] A simple PCR-RFLP method for identification and differentiation of 11 Malassezia species
    Mirhendi, H
    Makimura, K
    Zomorodian, K
    Yamada, T
    Sugita, T
    Yamaguchi, H
    JOURNAL OF MICROBIOLOGICAL METHODS, 2005, 61 (02) : 281 - 284
  • [25] Molecular identification of biwa trout (Oncorhynchus masou rhodurus) using PCR-RFLP method
    Matsumoto, Chihiro
    Kyota, Yukino
    Yamanaka, Shunya
    Murakawa, Naoki
    Kikunaga, Ryutaro
    Yamada, Yoshihiro
    Kawachi, Hiroyuki
    JOURNAL OF FOOD SCIENCE AND TECHNOLOGY-MYSORE, 2019, 56 (10): : 4705 - 4713
  • [26] Authentication of fish species using a simple PCR-RFLP method
    Hisar, O
    Erdogan, O
    Aksakal, E
    Hisar, SA
    ISRAELI JOURNAL OF AQUACULTURE-BAMIDGEH, 2006, 58 (01): : 62 - 65
  • [27] A new amplification target for PCR-RFLP detection and identification of Chlamydiaceae species
    Demkin, VV
    Zimin, AL
    ARCHIVES OF MICROBIOLOGY, 2005, 183 (03) : 169 - 175
  • [28] MINIEXON PCR-RFLP FOR LEISHMANIA SPECIES IDENTIFICATION IN NEW WORLD LEISHMANIASIS
    Ovalle Bracho, Clemencia
    Diaz Toro, Yira R.
    Velandia, Daniel
    Muvdi, Sandra
    AMERICAN JOURNAL OF TROPICAL MEDICINE AND HYGIENE, 2008, 79 (06): : 160 - 161
  • [29] Identification of deer antler species using sequence analysis and PCR-RFLP of mitochondrial DNA
    Shin, Ki-Hyun
    Shin, Sung-Chul
    Chung, Ku-Young
    Chung, Eui-Ryong
    KOREAN JOURNAL FOR FOOD SCIENCE OF ANIMAL RESOURCES, 2008, 28 (03) : 276 - 282
  • [30] Molecular identification of Sinopodophyllum hexandrum and Dysosma species using cpDNA sequences and PCR-RFLP markers
    Gong, Wei
    Fu, Cheng-Xin
    Luo, Yu-Ping
    Qiu, Ying-Xiong
    PLANTA MEDICA, 2006, 72 (07) : 650 - 652