DNA analysis;
Forensics;
Massively parallel sequencing;
Short tandem repeat;
Single nucleotide polymorphism;
AMPLISEQ(TM) IDENTITY PANEL;
PERSONAL GENOME MACHINE;
TORRENT PGM(TM) PLATFORM;
SIGNATURE PREP KIT;
ID ANCESTRY PANEL;
HID STR 10-PLEX;
ION PGM(TM);
DEVELOPMENTAL VALIDATION;
MITOCHONDRIAL GENOME;
FORENSEQ(TM) SYSTEM;
D O I:
10.1002/elps.201800082
中图分类号:
Q5 [生物化学];
学科分类号:
071010 ;
081704 ;
摘要:
DNA sequencing, starting with Sanger's chain termination method in 1977 and evolving into the next generation sequencing (NGS) techniques of today that employ massively parallel sequencing (MPS), has become essential in application areas such as biotechnology, virology, and medical diagnostics. Reflected by the growing number of articles published over the last 2-3 years, these techniques have also gained attention in the forensic field. This review contains a brief description of first, second, and third generation sequencing techniques, and focuses on the recent developments in human DNA analysis applicable in the forensic field. Relevance to the forensic analysis is that besides generation of standard STR-profiles, DNA repeats can also be sequenced to look for polymorphisms. Furthermore, additional SNPs can be sequenced to acquire information on ancestry, paternity or phenotype. The current MPS systems are also very helpful in cases where only a limited amount of DNA or highly degraded DNA has been secured from a crime scene. If enough autosomal DNA is not present, mitochondrial DNA can be sequenced for maternal lineage analysis. These developments clearly demonstrate that the use of NGS will grow into an indispensable tool for forensic science.
机构:
Georgia Hlth Sci Univ, GHSU Canc Ctr, Augusta, GA 30912 USA
Georgia Hlth Sci Univ, Dept Biochem & Mol Biol, Augusta, GA 30912 USAGeorgia Hlth Sci Univ, GHSU Canc Ctr, Augusta, GA 30912 USA
Lee, Eun-Joon
Pei, Lirong
论文数: 0引用数: 0
h-index: 0
机构:
Georgia Hlth Sci Univ, GHSU Canc Ctr, Augusta, GA 30912 USA
Georgia Hlth Sci Univ, Dept Biochem & Mol Biol, Augusta, GA 30912 USAGeorgia Hlth Sci Univ, GHSU Canc Ctr, Augusta, GA 30912 USA
Pei, Lirong
Srivastava, Gyan
论文数: 0引用数: 0
h-index: 0
机构:
Univ Missouri, Christopher S Bond Life Sci Ctr, Dept Comp Sci, Columbia, MO 65211 USA
Univ Missouri, Inst Informat, Columbia, MO 65211 USAGeorgia Hlth Sci Univ, GHSU Canc Ctr, Augusta, GA 30912 USA
Srivastava, Gyan
Joshi, Trupti
论文数: 0引用数: 0
h-index: 0
机构:
Univ Missouri, Christopher S Bond Life Sci Ctr, Dept Comp Sci, Columbia, MO 65211 USA
Univ Missouri, Inst Informat, Columbia, MO 65211 USAGeorgia Hlth Sci Univ, GHSU Canc Ctr, Augusta, GA 30912 USA
Joshi, Trupti
Kushwaha, Garima
论文数: 0引用数: 0
h-index: 0
机构:
Univ Missouri, Christopher S Bond Life Sci Ctr, Dept Comp Sci, Columbia, MO 65211 USA
Univ Missouri, Inst Informat, Columbia, MO 65211 USAGeorgia Hlth Sci Univ, GHSU Canc Ctr, Augusta, GA 30912 USA
Kushwaha, Garima
Choi, Jeong-Hyeon
论文数: 0引用数: 0
h-index: 0
机构:
Georgia Hlth Sci Univ, GHSU Canc Ctr, Augusta, GA 30912 USA
Georgia Hlth Sci Univ, Dept Biostat, Augusta, GA 30912 USAGeorgia Hlth Sci Univ, GHSU Canc Ctr, Augusta, GA 30912 USA
Choi, Jeong-Hyeon
Robertson, Keith D.
论文数: 0引用数: 0
h-index: 0
机构:
Georgia Hlth Sci Univ, GHSU Canc Ctr, Augusta, GA 30912 USA
Georgia Hlth Sci Univ, Dept Biochem & Mol Biol, Augusta, GA 30912 USAGeorgia Hlth Sci Univ, GHSU Canc Ctr, Augusta, GA 30912 USA
Robertson, Keith D.
Wang, Xinguo
论文数: 0引用数: 0
h-index: 0
机构:
David H Murdock Res Inst, Kannapolis, NC 28081 USAGeorgia Hlth Sci Univ, GHSU Canc Ctr, Augusta, GA 30912 USA
Wang, Xinguo
论文数: 引用数:
h-index:
机构:
Colbourne, John K.
Zhang, Lu
论文数: 0引用数: 0
h-index: 0
机构:
Illumina Inc Hayward, Hayward, CA 94545 USAGeorgia Hlth Sci Univ, GHSU Canc Ctr, Augusta, GA 30912 USA
Zhang, Lu
Schroth, Gary P.
论文数: 0引用数: 0
h-index: 0
机构:
Illumina Inc Hayward, Hayward, CA 94545 USAGeorgia Hlth Sci Univ, GHSU Canc Ctr, Augusta, GA 30912 USA
Schroth, Gary P.
Xu, Dong
论文数: 0引用数: 0
h-index: 0
机构:
Univ Missouri, Christopher S Bond Life Sci Ctr, Dept Comp Sci, Columbia, MO 65211 USA
Univ Missouri, Inst Informat, Columbia, MO 65211 USAGeorgia Hlth Sci Univ, GHSU Canc Ctr, Augusta, GA 30912 USA
Xu, Dong
Zhang, Kun
论文数: 0引用数: 0
h-index: 0
机构:
Univ Calif San Diego, Dept Bioengn, La Jolla, CA 92093 USAGeorgia Hlth Sci Univ, GHSU Canc Ctr, Augusta, GA 30912 USA
Zhang, Kun
Shi, Huidong
论文数: 0引用数: 0
h-index: 0
机构:
Georgia Hlth Sci Univ, GHSU Canc Ctr, Augusta, GA 30912 USA
Georgia Hlth Sci Univ, Dept Biochem & Mol Biol, Augusta, GA 30912 USAGeorgia Hlth Sci Univ, GHSU Canc Ctr, Augusta, GA 30912 USA
机构:
Natl Forens Serv, Med Examiners Off, Wonju, South KoreaNatl Forens Serv, Med Examiners Off, Wonju, South Korea
Park, Sohyung
Cho, Sohee
论文数: 0引用数: 0
h-index: 0
机构:
Seoul Natl Univ, Inst Forens Sci, Coll Med, Seoul, South KoreaNatl Forens Serv, Med Examiners Off, Wonju, South Korea
Cho, Sohee
Seo, Hee Jin
论文数: 0引用数: 0
h-index: 0
机构:
Seoul Natl Univ, Dept Forens Med, Coll Med, 103 Daehak Ro, Seoul 03080, South KoreaNatl Forens Serv, Med Examiners Off, Wonju, South Korea
Seo, Hee Jin
Lee, Ji Hyun
论文数: 0引用数: 0
h-index: 0
机构:
Seoul Natl Univ, Dept Forens Med, Coll Med, 103 Daehak Ro, Seoul 03080, South KoreaNatl Forens Serv, Med Examiners Off, Wonju, South Korea
Lee, Ji Hyun
Kim, Moon-Young
论文数: 0引用数: 0
h-index: 0
机构:
Seoul Natl Univ, Dept Forens Med, Coll Med, 103 Daehak Ro, Seoul 03080, South KoreaNatl Forens Serv, Med Examiners Off, Wonju, South Korea
Kim, Moon-Young
Lee, Soong Deok
论文数: 0引用数: 0
h-index: 0
机构:
Seoul Natl Univ, Inst Forens Sci, Coll Med, Seoul, South Korea
Seoul Natl Univ, Dept Forens Med, Coll Med, 103 Daehak Ro, Seoul 03080, South KoreaNatl Forens Serv, Med Examiners Off, Wonju, South Korea
机构:
Univ Washington, Dept Med, Seattle, WA USA
Puget Sound Blood Ctr, Res Inst, Seattle, WA 98104 USAUniv Washington, Dept Med, Seattle, WA USA
Johnsen, Jill M.
Nickerson, Deborah A.
论文数: 0引用数: 0
h-index: 0
机构:
Univ Washington, Dept Genome Sci, Seattle, WA 98195 USAUniv Washington, Dept Med, Seattle, WA USA
Nickerson, Deborah A.
Reiner, Alex P.
论文数: 0引用数: 0
h-index: 0
机构:
Univ Washington, Sch Publ Hlth, Dept Epidemiol, Seattle, WA 98195 USA
Fred Hutchinson Canc Res Ctr, Div Publ Hlth Sci, Seattle, WA 98104 USAUniv Washington, Dept Med, Seattle, WA USA
机构:
Univ North Texas, Ctr Human Identificat, Hlth Sci Ctr, 3500 Camp Bowie Blvd,CBH 250, Ft Worth, TX 76107 USA
King Abdulaziz Univ, CEGMR, Jeddah, Saudi ArabiaUniv North Texas, Ctr Human Identificat, Hlth Sci Ctr, 3500 Camp Bowie Blvd,CBH 250, Ft Worth, TX 76107 USA
Budowle, Bruce
Schmedes, Sarah E.
论文数: 0引用数: 0
h-index: 0
机构:
Univ North Texas, Ctr Human Identificat, Hlth Sci Ctr, 3500 Camp Bowie Blvd,CBH 250, Ft Worth, TX 76107 USAUniv North Texas, Ctr Human Identificat, Hlth Sci Ctr, 3500 Camp Bowie Blvd,CBH 250, Ft Worth, TX 76107 USA
Schmedes, Sarah E.
Wendt, Frank R.
论文数: 0引用数: 0
h-index: 0
机构:
Univ North Texas, Ctr Human Identificat, Hlth Sci Ctr, 3500 Camp Bowie Blvd,CBH 250, Ft Worth, TX 76107 USAUniv North Texas, Ctr Human Identificat, Hlth Sci Ctr, 3500 Camp Bowie Blvd,CBH 250, Ft Worth, TX 76107 USA