Metabarcoding Analysis of Harmful Algal Bloom Species in the Western Pacific Seamount Regions

被引:10
|
作者
Xu, Qing [1 ,2 ,3 ,4 ]
Wang, Chunzhi [1 ,2 ,3 ]
Xu, Kuidong [3 ,5 ,6 ]
Chen, Nansheng [1 ,2 ,3 ,7 ]
机构
[1] Chinese Acad Sci, Inst Oceanol, CAS Key Lab Marine Ecol & Environm Sci, Qingdao 266071, Peoples R China
[2] Qingdao Natl Lab Marine Sci & Technol, Lab Marine Ecol & Environm Sci, Qingdao 266237, Peoples R China
[3] Chinese Acad Sci, Ctr Ocean Megasci, Qingdao 266071, Peoples R China
[4] Huazhong Agr Univ, Coll Life Sci & Technol, Wuhan 430070, Peoples R China
[5] Chinese Acad Sci, Inst Oceanol, Lab Marine Organism Taxon & Phylogeny, Qingdao 266071, Peoples R China
[6] Univ Chinese Acad Sci, Coll Marine Sci, Beijing 100049, Peoples R China
[7] Simon Fraser Univ, Dept Mol Biol & Biochem, Burnaby, BC V5A 1S6, Canada
关键词
harmful algal bloom species (HABs); metabarcoding; amplicon sequence variant (ASV); Western Pacific seamount regions; PHYTOPLANKTON COMMUNITY STRUCTURE; AUREOCOCCUS-ANOPHAGEFFERENS; ALEXANDRIUM-ANDERSONII; BROWN TIDES; DINOPHYCEAE; VARIABILITY; DINOFLAGELLATE; GYMNODINIALES; MORPHOLOGY; PHYLOGENY;
D O I
10.3390/ijerph182111470
中图分类号
X [环境科学、安全科学];
学科分类号
08 ; 0830 ;
摘要
The Western Pacific is the most oligotrophic sea on Earth, with numerous seamounts. However, the plankton diversity and biogeography of the Western Pacific in general and the seamount regions in particular remains largely unexplored. In this project, we quantitatively analyzed the composition and distribution patterns of plankton species in the Western Pacific seamount regions by applying metabarcoding analysis. We identified 4601 amplicon sequence variants (ASVs) representing 34 classes in seven protist phyla/divisions in the Western Pacific seamount regions, among which Dinoflagellata was by far the most dominant division. Among the 336 annotated phytoplankton species (including species in Dinoflagellata), we identified 36 harmful algal bloom (HAB) species, many of which displayed unique spatial distribution patterns in the Western Pacific seamount regions. This study was the first attempt in applying ASV-based metabarcoding analysis in studying phytoplankton and HAB species in the Western Pacific seamount regions, which may facilitate further research on the potential correlation between HABs in the Western Pacific seamount regions and coastal regions.
引用
收藏
页数:17
相关论文
共 50 条
  • [21] Algicidal efficiency and mechanism of Phanerochaete chrysosporium against harmful algal bloom species
    Zeng, Guoming
    Wang, Pu
    Wang, Ying
    [J]. ALGAL RESEARCH-BIOMASS BIOFUELS AND BIOPRODUCTS, 2015, 12 : 182 - 190
  • [22] Emerging harmful algal bloom species over the last four decades in China
    Gu, Haifeng
    Wu, Yiran
    Lu, Songhui
    Lu, Douding
    Tang, Ying Zhong
    Qi, Yuzao
    [J]. HARMFUL ALGAE, 2022, 111
  • [23] Mitochondrial genome of the harmful algal bloom species Odontella regia (Mediophyceae, Bacillariophyta)
    Yichao Wang
    Yang Chen
    Jing Wang
    Feng Liu
    Nansheng Chen
    [J]. Journal of Applied Phycology, 2021, 33 : 855 - 868
  • [24] The distribution and impacts of harmful algal bloom species in eastern boundary upwelling systems
    Trainer, V. L.
    Pitcher, G. C.
    Reguera, B.
    Smayda, T. J.
    [J]. PROGRESS IN OCEANOGRAPHY, 2010, 85 (1-2) : 33 - 52
  • [25] Recent Progress in the Study of Peroxiredoxin in the Harmful Algal Bloom Species Chattonella marina
    Shimasaki, Yohei
    Mukai, Koki
    Takai, Yuki
    Qiu, Xuchun
    Oshima, Yuji
    [J]. ANTIOXIDANTS, 2021, 10 (02) : 1 - 22
  • [26] Marine bacteria antagonistic to the harmful algal bloom species Alexandrium tamarense (Dinophyceae)
    Su, Jianqiang
    Yang, Xiaoru
    Zhou, Yanyan
    Zheng, Tianling
    [J]. BIOLOGICAL CONTROL, 2011, 56 (02) : 132 - 138
  • [27] NGS-metabarcoding revealing novel foraminiferal diversity in the Western Pacific Magellan Seamount sediments
    Shi, Junfeng
    Lei, Yanli
    Li, Haotian
    Li, Tiegang
    [J]. JOURNAL OF OCEANOLOGY AND LIMNOLOGY, 2021, 39 (05) : 1718 - 1729
  • [28] The effect of protocatechuic acid on the phycosphere in harmful algal bloom species Scrippsiella trochoidea
    Chen, Qi
    Zhu, Bo
    Sun, Dong
    Liu, Weijie
    Sun, Xian
    Duan, Shunshan
    [J]. AQUATIC TOXICOLOGY, 2020, 227
  • [29] NGS-metabarcoding revealing novel foraminiferal diversity in the Western Pacific Magellan Seamount sediments
    Junfeng Shi
    Yanli Lei
    Haotian Li
    Tiegang Li
    [J]. Journal of Oceanology and Limnology, 2021, 39 : 1718 - 1729
  • [30] Mitochondrial genome of the harmful algal bloom species Odontella regia (Mediophyceae, Bacillariophyta)
    Wang, Yichao
    Chen, Yang
    Wang, Jing
    Liu, Feng
    Chen, Nansheng
    [J]. JOURNAL OF APPLIED PHYCOLOGY, 2021, 33 (02) : 855 - 868