A hyperspectral dataset of precancerous lesions in gastric cancer and benchmarks for pathological diagnosis

被引:15
|
作者
Zhang, Ying [1 ,2 ]
Wang, Yan [1 ,3 ,4 ]
Zhang, Benyan [5 ]
Li, Qingli [1 ,2 ,3 ,4 ]
机构
[1] East China Normal Univ, Shanghai Key Lab Multidimens Informat Proc, Shanghai 200241, Peoples R China
[2] East China Normal Univ, Minist Educ, Engn Res Ctr Nanophoton & Adv Instrument, Shanghai, Peoples R China
[3] Engn Ctr SHMEC Space Informat, Shanghai, Peoples R China
[4] GNSS, Shanghai, Peoples R China
[5] Shanghai Jiao Tong Univ, Ruijin Hosp, Dept Pathol, Sch Med, Shanghai, Peoples R China
基金
中国国家自然科学基金;
关键词
microscopic hyperspectral image; pathology diagnosis; precancerous lesions in gastric cancer dataset; self-supervised learning; CLASSIFICATION;
D O I
10.1002/jbio.202200163
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
Gastric cancer (GC) is one of the most common cancers worldwide. A lot of studies have found that early GC has good prognosis. Unfortunately, the diagnosis rate of early GC is suboptimal due to inadequate disease screening and the insidious nature of early lesions. Pathological diagnosis is usually regarded as the "gold standard" for the diagnosis of GC. However, traditional pathological diagnosis is tedious and time-consuming. With the development of deep learning, computer-aided diagnosis is widely used to assist pathologists for diagnosis. As conventional pathology, diagnosis is based on color images, it is not as informative as hyperspectral imaging, which introduces spectroscopy into imaging techniques. This article combines microscopic hyperspectral image (HSI) with deep learning networks to assist in the diagnosis of precancerous lesions in gastric cancer (PLGC). A large scale microscopic hyperspectral PLGC dataset with 924 effective scenes is built and self-supervised learning is adopted to provide pretrained models for HSI. These pretrained models effectively improve the performance of downstream classification tasks. Furthermore, a symmetrically deep connected network is proposed to train with images from different imaging modalities and improve the diagnostic accuracy to 96.59%.
引用
收藏
页数:13
相关论文
共 50 条
  • [1] Comparison of NBI and chromoendoscopy in diagnosis of early gastric cancer and precancerous lesions
    Li Shu
    Lin Rui
    Zhou Lu
    Wang Bangmao
    [J]. JOURNAL OF GASTROENTEROLOGY AND HEPATOLOGY, 2013, 28 : 732 - 732
  • [2] Microendoscopy in vivo for the pathological diagnosis of cervical precancerous lesions and early cervical cancer
    Min Liu
    Jianqiao Lu
    Yong Zhi
    Yetian Ruan
    Guangxu Cao
    Xinxin Xu
    Xin An
    Jinli Gao
    Fang Li
    [J]. Infectious Agents and Cancer, 18
  • [3] Microendoscopy in vivo for the pathological diagnosis of cervical precancerous lesions and early cervical cancer
    Liu, Min
    Lu, Jianqiao
    Zhi, Yong
    Ruan, Yetian
    Cao, Guangxu
    Xu, Xinxin
    An, Xin
    Gao, Jinli
    Li, Fang
    [J]. INFECTIOUS AGENTS AND CANCER, 2023, 18 (01)
  • [4] Gastric cancer and precancerous lesions in Burundi
    Ntagirabiri, R.
    Mumana, A.
    Marerwa, G.
    Nifasha, A.
    Ntunzwenimana, T.
    [J]. JOURNAL AFRICAIN D HEPATO-GASTROENTEROLOGIE, 2013, 7 (03): : 130 - 133
  • [5] A Cervical Histopathology Dataset for Computer Aided Diagnosis of Precancerous Lesions
    Meng, Zhu
    Zhao, Zhicheng
    Li, Bingyang
    Su, Fei
    Guo, Limei
    [J]. IEEE TRANSACTIONS ON MEDICAL IMAGING, 2021, 40 (06) : 1531 - 1541
  • [6] Survivin as a potential biomarker for early diagnosis of the progression of precancerous lesions to gastric cancer
    Mahmoudzadeh-Sagheb, Amirreza
    Panahi, Mehran
    Jami, Setareh
    Moudi, Bita
    Mahmoudzadeh-Sagheb, Hamidreza
    Heidari, Zahra
    [J]. INTERNATIONAL JOURNAL OF BIOLOGICAL MARKERS, 2024, 39 (01): : 52 - 58
  • [7] Microsatellite instability of gastric cancer and precancerous lesions
    Li, Bing
    Liu, Hong-Yi
    Guo, Shao-Hua
    Sun, Peng
    Gong, Fang-Ming
    Jia, Bao-Qing
    [J]. INTERNATIONAL JOURNAL OF CLINICAL AND EXPERIMENTAL MEDICINE, 2015, 8 (11): : 21138 - 21144
  • [8] Precancerous lesions of the stomach, gastric cancer and hereditary gastric cancer syndromes
    Gullo, Irene
    Grillo, Federica
    Mastracci, Luca
    Vanoli, Alessandro
    Carneiro, Fatima
    Saragoni, Luca
    Limarzi, Francesco
    Ferro, Jacopo
    Parente, Paola
    Fassan, Matteo
    [J]. PATHOLOGICA, 2020, 112 (03) : 166 - 185
  • [10] Expression of TERT in precancerous gastric lesions compared to gastric cancer
    Duarte, M. C.
    Babeto, E.
    Leite, K. R. M.
    Miyazaki, K.
    Borim, A. A.
    Rahal, P.
    Silva, A. E.
    [J]. BRAZILIAN JOURNAL OF MEDICAL AND BIOLOGICAL RESEARCH, 2011, 44 (02) : 100 - 104