PRIDEViewer: A novel user-friendly interface to visualize PRIDE XML files

被引：4
|
作者：
Alberto Medina-Aunon, J. [1 ]
Carazo, Jose M. [2 ]
Pablo Albar, Juan [1 ]
机构：
[1] CSIC, CNB, Prote Facil, Madrid 28049, Spain
[2] CSIC, CNB, Biocomp Unit, Madrid 28049, Spain
来源：
PROTEOMICS | 2011年 / 11卷 / 02期
关键词：
PROTEOMICS; IDENTIFICATIONS; PROTEIN;
D O I：
10.1002/pmic.201000448
中图分类号：
Q5 [生物化学];
学科分类号：
071010 ; 081704 ;
摘要：
Current standardization initiatives have greatly contributed to share the information derived by proteomics experiments. One of these initiatives is the XML-based repository PRIDE (PRoteomics IDEntification database), although an XML-based document does not appear to present a user-friendly view at the first glance. PRIDEViewer is a novel Java-based application that presents the information available in a PRIDE XML file in a user-friendly manner, facilitating the interaction among end users as well as the understanding and evaluation of the compiled information. PRIDEViewer is freely available at: http://proteo.cnb.csic.es/prideviewer/.
引用
收藏
页码：334 / 337
页数：4
相关论文
共 50 条
  • [1] User-friendly interface for fast and easy construction of Dalton input files
    Karin Holk
    Andreas L. Vishart
    Kurt V. Mikkelsen
    Journal of Molecular Modeling, 2020, 26
  • [2] User-friendly interface for fast and easy construction of Dalton input files
    Holk, Karin
    Vishart, Andreas L.
    Mikkelsen, Kurt, V
    JOURNAL OF MOLECULAR MODELING, 2020, 26 (10)
  • [3] PDB-tools web: A user-friendly interface for the manipulation of PDB files
    Jimenez-Garcia, Brian
    Teixeira, Joao M. C.
    Trellet, Mikael
    Rodrigues, Joao P. G. L. M.
    Bonvin, Alexandre M. J. J.
    PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS, 2021, 89 (03) : 330 - 335
  • [4] Chemoface: a Novel Free User-Friendly Interface for Chemometrics
    Nunes, Cleiton A.
    Freitas, Matheus P.
    Pinheiro, Ana Carla M.
    Bastos, Sabrina C.
    JOURNAL OF THE BRAZILIAN CHEMICAL SOCIETY, 2012, 23 (11) : 2003 - 2010
  • [5] A USER-FRIENDLY INTERFACE ADAPTER
    BOWEN, J
    MICROPROCESSORS AND MICROSYSTEMS, 1985, 9 (09) : 432 - 439
  • [6] User-friendly Interface for GPGPU Programming
    Gamaarachchi, Hasindu
    Fawsan, Mohamed
    Fasna, Fathima
    Elkaduwe, Dhammika
    PROCEEDINGS OF THE 2017 6TH NATIONAL CONFERENCE ON TECHNOLOGY & MANAGEMENT (NCTM) - EXCEL IN RESEARCH AND BUILD THE NATION, 2017, : 99 - 104
  • [7] PRINCIPLES OF USER-FRIENDLY INTERFACE DESIGN
    ROGERS, CB
    FU, HJ
    45TH ANNUAL QUALITY CONGRESS TRANSACTIONS, 1991, : 512 - 517
  • [8] Development of a user-friendly interface for the creation of user elements
    Kinshuk
    INTERNATIONAL JOURNAL OF ELECTRICAL ENGINEERING EDUCATION, 1996, 33 (04) : 344 - 352
  • [9] VACXENE: A user-friendly visual synthetic XML generator
    Tian, KB
    Bhowmick, SS
    Madria, S
    CONCEPTUAL MODELING FOR NOVEL APPLICATION DOMAINS, PROCEEDINGS, 2003, 2814 : 355 - 365
  • [10] Development of a user-friendly interface for the creation of user elements
    CAL Software Engineering and, Research Cent, Leicester, United Kingdom
    Int J Electr Eng Educ, 4 (344-352):
12345