Modeling the Kinetics of Open Self-Assembly

被引:5
|
作者
Verdier, Timothee [1 ]
Foret, Lionel [2 ]
Castelnovo, Martin [1 ]
机构
[1] Univ Lyon 1, CNRS, Ens Lyon, Lab Phys, F-69342 Lyon, France
[2] Univ Paris 06, Sorbonne Univ, Univ Paris Diderot,Sorbonne Paris Cite,CNRS, Lab Phys Stat,Ecole Normale Super,PSL Res Univ, 24 Rue Lhomond, F-75005 Paris, France
来源
JOURNAL OF PHYSICAL CHEMISTRY B | 2016年 / 120卷 / 26期
关键词
COAGULATION; EQUATIONS; TIMES;
D O I
10.1021/acs.jpcb.6b03899
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
In this work, we explore theoretically the kinetics of molecular self-assembly in the presence of constant monomer flux as an input, and a maximal size. The proposed model is supposed to reproduce the dynamics of viral self-assembly for enveloped virus. It turns out that the kinetics of open self-assembly is rather quantitatively different from the kinetics of similar closed assembly. In particular, our results show that the convergence toward the stationary state is reached through assembly waves. Interestingly, we show that the production of complete clusters is much more efficient in the presence of a constant input flux, rather than providing all monomers at the beginning of the self-assembly.
引用
收藏
页码:6411 / 6420
页数:10
相关论文
共 50 条
  • [21] A Modeling Approach to the Self-Assembly of the Golgi Apparatus
    Kuehnle, Jens
    Shillcock, Julian
    Mouritsen, Ole G.
    Weiss, Matthias
    BIOPHYSICAL JOURNAL, 2010, 98 (12) : 2839 - 2847
  • [22] Modeling the Self-Assembly of Colloidal Nanorod Superlattices
    Titov, Alexey V.
    Kral, Petr
    NANO LETTERS, 2008, 8 (11) : 3605 - 3612
  • [23] Modeling capsid self-assembly: design and analysis
    Rapaport, D. C.
    PHYSICAL BIOLOGY, 2010, 7 (04)
  • [24] Modeling the Self-assembly of the Cellulosome Enzyme Complex
    Bomble, Yannick J.
    Beckham, Gregg T.
    Matthews, James F.
    Nimlos, Mark R.
    Himmel, Michael E.
    Crowley, Michael F.
    JOURNAL OF BIOLOGICAL CHEMISTRY, 2011, 286 (07) : 5614 - 5623
  • [25] Understanding peptide self-assembly with multiscale modeling
    Li, Jianing
    ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY, 2016, 252
  • [26] Modeling electrothermal plastic deformation self-assembly
    Geisberger, A
    Jungen, A
    Sarkar, N
    Ellis, M
    Skidmore, G
    NANOTECH 2003, VOL 1, 2003, : 482 - 485
  • [27] Discovering efficient self-assembly pathways through optimization of assembly kinetics
    Jhaveri, Adip
    BIOPHYSICAL JOURNAL, 2024, 123 (03) : 475A - 475A
  • [28] KINETICS OF AROMATIC DICARBOXYLIC-ACID SELF-ASSEMBLY
    QUN, W
    CAMMARATA, V
    ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY, 1993, 206 : 152 - COLL
  • [29] Uncovering the Self-Assembly of DNA Nanostructures by Thermodynamics and Kinetics
    Wei, Xixi
    Nangreave, Jeanette
    Liu, Yan
    ACCOUNTS OF CHEMICAL RESEARCH, 2014, 47 (06) : 1861 - 1870
  • [30] Kinetics of self-assembly on high temperature superconductors.
    Murray, WR
    Schougaard, SB
    Kim, S
    McDevitt, JT
    ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY, 2003, 225 : U166 - U166