Structure of Francisella tularensis peptidyl-tRNA hydrolase

被引:21
|
作者
Clarke, Teresa E. [1 ,2 ]
Romanov, Vladimir [1 ,2 ]
Lam, Robert [1 ,2 ]
Gothe, Scott A. [3 ]
Peddi, Srinivasa R. [3 ]
Razumova, Ekaterina B. [2 ]
Lipman, Richard S. A. [3 ]
Branstrom, Arthur A. [3 ]
Chirgadze, Nickolay Y. [1 ,2 ,4 ]
机构
[1] Ontario Canc Inst, Univ Hlth Network, Div Canc Genom & Prote, Toronto, ON M5G 2C4, Canada
[2] NEXTEX Technol Inc, Toronto, ON M4N 1W6, Canada
[3] PTC Therapeut Inc, S Plainfield, NJ 07080 USA
[4] Univ Toronto, Dept Pharmacol & Toxicol, Toronto, ON M5S 1A8, Canada
关键词
peptidyl-tRNA hydrolases; Francisella tularensis; CRYSTAL-STRUCTURE; ANGSTROM RESOLUTION; METABOLIC ROLE; PROTEIN; ENZYME;
D O I
10.1107/S174430911100515X
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
The rational design of novel antibiotics for bacteria involves the identification of inhibitors for enzymes involved in essential biochemical pathways in cells. In this study, the cloning, expression, purification, crystallization and structure of the enzyme peptidyl-tRNA hydrolase from Francisella tularensis, the causative agent of tularemia, was performed. The structure of F. tularensis peptidyl-tRNA hydrolase is comparable to those of other bacterial peptidyl-tRNA hydrolases, with most residues in the active site conserved amongst the family. The resultant reagents, structural data and analyses provide essential information for the structure-based design of novel inhibitors for this class of proteins.
引用
收藏
页码:446 / 449
页数:4
相关论文
共 50 条
  • [21] Expression, purification, and characterization of peptidyl-tRNA hydrolase from Staphylococcus aureus
    Bonin, PD
    Choi, GH
    Trepod, CM
    Mott, JE
    Lyle, SB
    Cialdella, JI
    Sarver, RW
    Marshall, VP
    Erickson, LA
    PROTEIN EXPRESSION AND PURIFICATION, 2002, 24 (01) : 123 - 130
  • [22] RNA-binding Site of Escherichia coli Peptidyl-tRNA Hydrolase
    Giorgi, Laurent
    Bontems, Francois
    Fromant, Michel
    Aubard, Caroline
    Blanquet, Sylvain
    Plateau, Pierre
    JOURNAL OF BIOLOGICAL CHEMISTRY, 2011, 286 (45) : 39585 - 39594
  • [23] Transcriptional analysis of the gene encoding peptidyl-tRNA hydrolase in Escherichia coli
    Cruz-Vera, LR
    Galindo, JM
    Guarneros, G
    MICROBIOLOGY-SGM, 2002, 148 : 3457 - 3466
  • [24] ENZYMATIC HYDROLYSIS OF PEPTIDYL-TRNA
    DEGROOT, N
    PANET, A
    LAPIDOT, Y
    BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS, 1968, 31 (01) : 37 - &
  • [25] Suppression of thermosensitive peptidyl-tRNA hydrolase mutation in Escherichia coli by gene duplication
    Menez, J
    Remy, E
    Buckingham, RH
    MICROBIOLOGY-SGM, 2001, 147 : 1581 - 1589
  • [26] Recruitment of a peptidyl-tRNA hydrolase as a facilitator of group II intron splicing in chloroplasts
    Jenkins, BD
    Barkan, A
    EMBO JOURNAL, 2001, 20 (04): : 872 - 879
  • [27] Crystal structure at 1.8 Å resolution and identification of active site residues of Sulfolobus solfataricus peptidyl-tRNA hydrolase
    Fromant, M
    Schmitt, E
    Mechulam, Y
    Lazennec, C
    Plateau, P
    Blanquet, S
    BIOCHEMISTRY, 2005, 44 (11) : 4294 - 4301
  • [28] Structural characterization of peptidyl-tRNA hydrolase from Mycobacterium smegmatis by NMR spectroscopy
    Kabra, Ashish
    Fatma, Farheen
    Shahid, Salman
    Pathak, Prem Prakash
    Yadav, Rahul
    Pulavarti, S. V. S. R. Krishna
    Tripathi, Sarita
    Jain, Anupam
    Arora, Ashish
    BIOCHIMICA ET BIOPHYSICA ACTA-PROTEINS AND PROTEOMICS, 2016, 1864 (10): : 1304 - 1314
  • [29] Inhibition of Essential Bacterial Peptidyl-tRNA Hydrolase Activity by Tropical Plant Extracts
    McFeeters, Hana
    Gilbert, Morgan J.
    Thompson, Rachel M.
    Setzer, William N.
    Cruz-Vera, Luis R.
    McFeeters, Robert L.
    NATURAL PRODUCT COMMUNICATIONS, 2012, 7 (08) : 1107 - 1110
  • [30] The unbearable lightness of peptidyl-tRNA
    Gallant, J
    Lindsley, D
    Masucci, J
    RIBOSOME: STRUCTURE, FUNCTION, ANTIBIOTICS, AND CELLULAR INTERACTIONS, 2000, : 385 - 396