Spectral Characterization of Guanine C4-OH Adduct: A Radiation and Quantum Chemical Study

被引:18
|
作者
Phadatare, Suvarna D. [1 ]
Sharma, Kiran Kumar K. [2 ]
Rao, B. S. M. [1 ,3 ]
Naumov, S. [4 ]
Sharmas, Geeta K. [1 ]
机构
[1] Univ Pune, Natl Ctr Free Radical Res NCFRR, Dept Chem, Pune 411007, Maharashtra, India
[2] N Maharashtra Univ, Dept Phys Chem, Sch Chem Sci, Jalgaon 425001, Maharashtra, India
[3] Indian Inst Sci Educ & Res IISER, Dept Chem, Pune 411021, Maharashtra, India
[4] Leibniz Inst Oberflachenmodifizierung EV IOM, D-04318 Leipzig, Germany
来源
JOURNAL OF PHYSICAL CHEMISTRY B | 2011年 / 115卷 / 46期
关键词
ONE-ELECTRON REDUCTION; AQUEOUS-SOLUTION; TRANSFORMATION REACTIONS; HYDRATED ELECTRONS; CENTER-DOT; OH-ADDUCT; DNA; RADICALS; MOIETY; NUCLEOTIDES;
D O I
10.1021/jp203899j
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
The reaction of hydroxyl radical ((OH)-O-center dot) with guanine was investigated under restricted pH condition (pH 4.6) using pulse radiolysis technique. The time-resolved optical transient absorption spectra showed two peaks centered at 300 and 330 nm at 4 mu s after the pulse which exhibited different reactivity toward molecular oxygen (O-2). The peak at 300 nm was found to be relatively more stable than the peak at 330 nm. The peak corresponding to 330 nm decayed within 20 mu s having a first order rate constant 4-7 x 10(4) s(-1) and was pH dependent. On longer time scale, the species decayed by a bimolecular process. The presence of O-2 did not affect its decay rate constant. The center dot OH reacts with guanine at pH 4.6 with a diffusion-controlled second order rate constant of >= 1 x 10(10) dm(3) s(-1). The reaction of Br-2(center dot-) O-2(center dot-) and 2-hydroxy-2-propyl radical with guanine was also investigated to differentiate among the one-electron oxidized, one-electron reduced species of guanine and the guanine OH adducts formed in the reaction of (OH)-O-center dot at pH 4.6. On the basis of the spectral characteristics and reactivity toward 02, two guanine-OH adduct species were identified (i) the C4-OH adduct species absorbing at 330 nm which has not been reported so far and (ii) the C8-OH adduct species absorbing at 300 rim in agreement with the known literature absorption features. Quantum chemical calculations using BHandHLYP with 6-31+G(d,p) basis set and excited state calculations using TDDFT for all possible transients complement the assignment of the observed spectral peak at 330 nm to the C4-OH adduct of guanine. Furthermore, steady state radiolysis revealed the formation of 8-hydroxy-guanine whose precursor is known to be the C8-OH adduct species.
引用
收藏
页码:13650 / 13658
页数:9
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