Identification of Putative β-Galactosidase Genes in the Genome of Lactobacillus helveticus OSU-PECh-4A

被引：2
|
作者：
Garcia-Cano, Israel [1 ]
Escobar-Zepeda, Alejandra [2 ,3 ]
Ruiz-Ramirez, Silvette [1 ]
Rocha-Mendoza, Diana [1 ]
Jimenez-Flores, Rafael [1 ]
机构：
[1] Ohio State Univ, Dept Food Sci & Technol, Columbus, OH 43210 USA
[2] Wellcome Sanger Inst, Host Microbiota Interact Lab, Wellcome Genome Campus, Hinxton, England
[3] European Bioinformat Inst, Microbiome Informat Team, Wellcome Genome Campus, Hinxton, England
来源：
MICROBIOLOGY RESOURCE ANNOUNCEMENTS | 2022年 / 11卷 / 01期
关键词：
D O I：
10.1128/MRA.00766-21
中图分类号：
Q93 [微生物学];
学科分类号：
071005 ; 100705 ;
摘要：
The Lactobacillus helveticus OSU-PECh-4A strain, from the Ohio State University Parker Chair collection, produces exceptional beta-galactosidase activity using acid whey as a culture medium, compared with a commercial broth. The strain has a genome sequence of 1,834,843 bp, and its GC content is 36.69%. Using InterProScan v5.50-84.0 software, four genes with putative beta-galactosidase function were found.
引用
收藏
页数：3
相关论文
共 50 条
  • [31] Characterization, identification and expression profiling of genome-wide R-genes in melon and their putative roles in bacterial fruit blotch resistance
    Md. Rafiqul Islam
    Mohammad Rashed Hossain
    Denison Michael Immanuel Jesse
    Hee-Jeong Jung
    Hoy-Taek Kim
    Jong-In Park
    Ill-Sup Nou
    BMC Genetics, 21
  • [32] Identification of putative non-host essential genes and novel drug targets against Acinetobacter baumannii by in silica comparative genome analysis
    Uddin, Reaz
    Masood, Fareha
    Azam, Syed Sikander
    Wadood, Abdul
    MICROBIAL PATHOGENESIS, 2019, 128 : 28 - 35
  • [33] Functional analysis of the plasmid pM4 replicon from Lactobacillus plantarum M4: Determination of the minimal replicon and functionality identification of the putative sso
    Yin, Sheng
    Hao, Yanling
    Zhai, Zhengyuan
    Zhang, Wei
    Zhou, Hui
    Wang, Guohong
    Shi, Xianli
    Luo, Yunbo
    PLASMID, 2009, 62 (03) : 166 - 171
  • [34] Molecular characterization of two lactate dehydrogenase genes with a novel structural organization on the genome of Lactobacillus sp strain MONT4
    Weekes, J
    Yüksel, GÜ
    APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 2004, 70 (10) : 6290 - 6295
  • [35] Genome-assisted identification of putative iron-utilization genes in Acinetobacter baumannii and their distribution among a genotypically diverse collection of clinical isolates
    Antunes, Luisa C. S.
    Imperi, Francesco
    Towner, Kevin J.
    Visca, Paolo
    RESEARCH IN MICROBIOLOGY, 2011, 162 (03) : 279 - 284
  • [36] IDENTIFICATION OF GENES ENCODING ZINC-FINGER PROTEINS, NONHISTONE CHROMOSOMAL HMG PROTEIN HOMOLOG, AND A PUTATIVE GTP PHOSPHOHYDROLASE IN THE GENOME OF CHILO IRIDESCENT VIRUS
    SCHNITZLER, P
    HUG, M
    HANDERMANN, M
    JANSSEN, W
    KOONIN, EV
    DELIUS, H
    DARAI, G
    NUCLEIC ACIDS RESEARCH, 1994, 22 (02) : 158 - 166
  • [37] Genome-wide identification of the CAD gene family and functional analysis of putative bona fide CAD genes in tobacco (Nicotiana tabacum L.)
    Wu, Mingzhu
    Li, Yijun
    Liu, Zhengtai
    Xia, Lin
    Xiang, Yiyu
    Zhao, Lijie
    Yang, Xiaobei
    Li, Zefeng
    Xie, Xiaodong
    Wang, Lin
    Wang, Ren
    Xu, Sheng
    Yang, Jun
    FRONTIERS IN PLANT SCIENCE, 2024, 15
  • [38] Genome-wide identification, characterization and relative expression analysis of putative iron homeostasis genes: NAS, NAAT, and DMAS in hexaploid wheat and its progenitors
    Kumar, Naveen
    Tiwari, Apoorv
    Pal, Neeraj
    Kumar, Sundip
    JOURNAL OF CEREAL SCIENCE, 2022, 105
  • [39] Identification of DPPA4 and other genes as putative Sox2:Oct-3/4 target genes using a combination of in silico analysis and transcription-based assays
    Chakravarthy, Harini
    Boer, Brian
    Desler, Michelle
    Mallanna, Sunil Kumar
    McKeithan, Timothy W.
    Rizzino, Angie
    JOURNAL OF CELLULAR PHYSIOLOGY, 2008, 216 (03) : 651 - 662
  • [40] Comparative genomic analysis of Lactobacillus plantarum GB-LP4 and identification of evolutionarily divergent genes in high-osmolarity environment
    Jaehoon Jung
    Kwondo Kim
    DongAhn Yoo
    Chanho Lee
    Jungsun Kang
    Kyungjin Cho
    Dae-Kyung Kang
    Woori Kwak
    Sook Hee Yoon
    Hawsun Sohn
    Heebal Kim
    Seoae Cho
    Genes & Genomics, 2018, 40 : 217 - 223
12345