DETECT-LC: A 3D Deep Learning and Textural Radiomics Computational Model for Lung Cancer Staging and Tumor Phenotyping Based on Computed Tomography Volumes

被引:6
|
作者
Fathalla, Karma M. [1 ]
Youssef, Sherin M. [1 ]
Mohammed, Nourhan [1 ]
机构
[1] Arab Acad Sci & Technol, Comp Engn Dept, Alexandria 1029, Egypt
来源
APPLIED SCIENCES-BASEL | 2022年 / 12卷 / 13期
关键词
radiomics; deep learning; 3D-CNN; computed tomography; staging; tumor phenotyping; CT;
D O I
10.3390/app12136318
中图分类号
O6 [化学];
学科分类号
0703 ;
摘要
Lung Cancer is one of the primary causes of cancer-related deaths worldwide. Timely diagnosis and precise staging are pivotal for treatment planning, and thus can lead to increased survival rates. The application of advanced machine learning techniques helps in effective diagnosis and staging. In this study, a multistage neurobased computational model is proposed, DETECT-LC learning. DETECT-LC handles the challenge of choosing discriminative CT slices for constructing 3D volumes, using Haralick, histogram-based radiomics, and unsupervised clustering. ALT-CNN-DENSE Net architecture is introduced as part of DETECT-LC for voxel-based classification. DETECT-LC offers an automatic threshold-based segmentation approach instead of the manual procedure, to help mitigate this burden for radiologists and clinicians. Also, DETECT-LC presents a slice selection approach and a newly proposed relatively light weight 3D CNN architecture to improve existing studies performance. The proposed pipeline is employed for tumor phenotyping and staging. DETECT-LC performance is assessed through a range of experiments, in which DETECT-LC attains outstanding performance surpassing its counterparts in terms of accuracy, sensitivity, F1-score and Area under Curve (AuC). For histopathology classification, DETECT-LC average performance achieved an improvement of 20% in overall accuracy, 0.19 in sensitivity, 0.16 in F1-Score and 0.16 in AuC over the state of the art. A similar enhancement is reached for staging, where higher overall accuracy, sensitivity and F1-score are attained with differences of 8%, 0.08 and 0.14.
引用
收藏
页数:23
相关论文
共 50 条
  • [41] Predicting the Prognosis of HIFU Ablation of Uterine Fibroids Using a Deep Learning-Based 3D Super-Resolution DWI Radiomics Model: A Multicenter Study
    Li, Chengwei
    He, Zhimin
    Lv, Fajin
    Liao, Hongjian
    Xiao, Zhibo
    ACADEMIC RADIOLOGY, 2024, 31 (12) : 4996 - 5007
  • [42] A 3D Tumor-Mimicking In Vitro Drug Release Model of Locoregional Chemoembolization Using Deep Learning-Based Quantitative Analyses
    Liu, Xiaoya
    Wang, Xueying
    Luo, Yucheng
    Wang, Meijuan
    Chen, Zijian
    Han, Xiaoyu
    Zhou, Sijia
    Wang, Jiahao
    Kong, Jian
    Yu, Hanry
    Wang, Xiaobo
    Tang, Xiaoying
    Guo, Qiongyu
    ADVANCED SCIENCE, 2023, 10 (11)
  • [43] A PET/CT-based 3D deep learning model for predicting spread through air spaces in stage I lung adenocarcinoma
    Zheng, Cheng
    Cai, Yujie
    Miao, Jiangfeng
    Zheng, Bingshu
    Gao, Yan
    Shen, Chen
    Bao, Shanlei
    Tan, Zhonghua
    Sun, Chunfeng
    CLINICAL & TRANSLATIONAL ONCOLOGY, 2025,
  • [44] Improving brain tumor classification performance with an effective approach based on new deep learning model named 3ACL from 3D MRI data
    Demir, Fatih
    Akbulut, Yaman
    Tasci, Burak
    Demir, Kursat
    BIOMEDICAL SIGNAL PROCESSING AND CONTROL, 2023, 81
  • [45] Flat-panel detector-based volume computed tomography: A novel 3D Imaging technique to monitor osteolytic bone lesions in a mouse tumor metastasis model
    Missbach-Guentner, Jeannine
    Dullin, Christian
    Zientkowska, Marta
    Domeyer-Missbach, Melanie
    Kimmina, Sarah
    Obenauer, Silvia
    Kauer, Fritz
    Stuehmer, Walter
    Grabbe, Eckhardt
    Vogel, Wolfgang F.
    Alves, Frauke
    NEOPLASIA, 2007, 9 (09): : 755 - 765
  • [46] Diagnostic accuracy of 3D deep-learning-based fully automated estimation of patient-level minimum fractional flow reserve from coronary computed tomography angiography
    Kumamaru, Kanako K.
    Fujimoto, Shinichiro
    Otsuka, Yujiro
    Kawasaki, Tomohiro
    Kawaguchi, Yuko
    Kato, Etsuro
    Takamura, Kazuhisa
    Aoshima, Chihiro
    Kamo, Yuki
    Kogure, Yosuke
    Inage, Hidekazu
    Daida, Hiroyuki
    Aoki, Shigeki
    EUROPEAN HEART JOURNAL-CARDIOVASCULAR IMAGING, 2020, 21 (04) : 437 - 445
  • [47] Automatic Liver Tumor Segmentation on Dynamic Contrast Enhanced MRI Using 4D Information: Deep Learning Model Based on 3D Convolution and Convolutional LSTM
    Zheng, Rencheng
    Wang, Qidong
    Lv, Shuangzhi
    Li, Cuiping
    Wang, Chengyan
    Chen, Weibo
    Wang, He
    IEEE TRANSACTIONS ON MEDICAL IMAGING, 2022, 41 (10) : 2965 - 2976
  • [48] Computed tomography and radiation dose images-based deep-learning model for predicting radiation pneumonitis in lung cancer patients after radiation therapy: A pilot study with external validation
    Zhang, Z.
    Wee, L.
    Dekker, A.
    Zhao, L.
    ANNALS OF ONCOLOGY, 2022, 33 (07) : S984 - S984
  • [49] A 3D CNN Model Using Deep Learning Based on Chest CT for Predicting Disease-Free Survival of Patients with Early-Stage Lung Cancer Receiving Surgery and SBRT
    Fu, Y.
    Hou, R.
    Fu, X.
    Qian, L.
    Feng, W.
    Zhang, Q.
    Ding, Z.
    Yu, W.
    Cai, X.
    Liu, J.
    INTERNATIONAL JOURNAL OF RADIATION ONCOLOGY BIOLOGY PHYSICS, 2024, 120 (02): : E20 - E21
  • [50] Deep learning-based survival prediction of brain tumor patients using attention-guided 3D convolutional neural network with radiomics approach from multimodality magnetic resonance imaging
    Mazher, Moona
    Qayyum, Abdul
    Puig, Domenec
    Abdel-Nasser, Mohamed
    INTERNATIONAL JOURNAL OF IMAGING SYSTEMS AND TECHNOLOGY, 2024, 34 (01)