Evolutionary and diagnostic implications of intragenomic heterogeneity in the 16S rRNA gene in Aeromonas strains

被引：75
|
作者：
Morandi, A
Zhaxybayeva, O
Gogarten, JP
Graf, J
机构：
[1] Univ Connecticut, Dept Mol & Cell Biol, Unit 3125, Storrs, CT 06269 USA
[2] Univ Bern, Inst Infect Dis, Bern, Switzerland
来源：
JOURNAL OF BACTERIOLOGY | 2005年 / 187卷 / 18期
关键词：
D O I：
10.1128/JB.187.18.6561-6564.2005
中图分类号：
Q93 [微生物学];
学科分类号：
071005 ; 100705 ;
摘要：
Sequencing 16S rRNA genes (SSU) cloned from Aeromonas strains revealed that strains contained up to six copies differing by <= 1.5%. The SSU copies from Aeromonas veronii LMG13695 clustered with sequences from four Aeromonas species. These results demonstrate intragenomic heterogeneity of SSU and suggest caution when using SSU to identify aeromonads.
引用
收藏
页码：6561 / 6564
页数：4
相关论文
共 50 条
  • [31] Identification of Acetobacter strains isolated in Thailand based on 16S-23S rRNA gene ITS restriction and 16S rRNA gene sequence analyses
    Kommanee, Jintana
    Akaracharanya, Ancharida
    Tanasupawat, Somboon
    Malimas, Taweesak
    Yukphan, Pattaraporn
    Nakagawa, Yasuyoshi
    Yamada, Yuzo
    ANNALS OF MICROBIOLOGY, 2008, 58 (02) : 319 - 324
  • [32] Optimization of 16S rRNA gene analysis for use in the diagnostic clinical microbiology service
    Sune, Dan
    Rydberg, Helene
    Augustinsson, Asa Nilsdotter
    Serrander, Lena
    Jungestrom, Malin Bergman
    JOURNAL OF MICROBIOLOGICAL METHODS, 2020, 170
  • [33] Specific characters of 16S rRNA gene and 16S–23S rRNA internal transcribed spacer sequences of Xylella fastidiosa pear leaf scorch strains
    Chiou-Chu Su
    Chung-Jan Chang
    Wen-Jen Yang
    Shih-Tien Hsu
    Kuo-Ching Tzeng
    Fuh-Jyh Jan
    Wen-Ling Deng
    European Journal of Plant Pathology, 2012, 132 : 203 - 216
  • [34] A tool for stewarding the use of 16S rRNA gene amplification and sequencing in diagnostic testing
    Filkins, Laura M.
    AMERICAN JOURNAL OF CLINICAL PATHOLOGY, 2023, 160 (05) : 438 - 440
  • [35] Intra-chromosomal heterogeneity between the four 16S rRNA gene copies in the genus Veillonella:: implications for phylogeny and taxonomy
    Marchandin, H
    Teyssier, C
    de Buochberg, MS
    Jean-Pierre, H
    Carriere, C
    Jumas-Bilak, E
    MICROBIOLOGY-SGM, 2003, 149 : 1493 - 1501
  • [36] 16S rRNA gene probes for Deinococcus species
    Wise, MG
    McArthur, JV
    Shimkets, LJ
    SYSTEMATIC AND APPLIED MICROBIOLOGY, 1996, 19 (03) : 365 - 369
  • [37] Intraspecific variation in the 16S rRNA gene sequences of Mycoplasma agalactiae and Mycoplasma bovis strains
    Königsson, MH
    Bölske, G
    Johansson, KE
    VETERINARY MICROBIOLOGY, 2002, 85 (03) : 209 - 220
  • [38] First-tier detection of intragenomic 16S rRNA gene variation in culturable endophytic bacteria from cacao seeds
    da Silva, Cleiziane Bispo
    Martins dos Santos, Hellen Ribeiro
    Santos Marbach, Phellippe Arthur
    de Souza, Jorge Teodoro
    Cruz-Magalhaes, Valter
    Argolo-Filho, Ronaldo Costa
    Loguercio, Leandro Lopes
    PEERJ, 2019, 7
  • [39] Comparative evaluation of 16S rRNA gene in world-wide strains of Streptococcus iniae and Streptococcus parauberis for early diagnostic marker
    Anshuman Mishra
    Gyu-Hwi Nam
    Jeong-An Gim
    Minji Seong
    Yunjeong Choe
    Hee-Eun Lee
    Ara Jo
    Suhkmann Kim
    Do-Hyung Kim
    Hee-Jae Cha
    Ho Young Kang
    Yung Hyun Choi
    Heui-Soo Kim
    Genes & Genomics, 2017, 39 : 779 - 791
  • [40] Comparative evaluation of 16S rRNA gene in world-wide strains of Streptococcus iniae and Streptococcus parauberis for early diagnostic marker
    Mishra, Anshuman
    Nam, Gyu-Hwi
    Gim, Jeong-An
    Seong, Minji
    Choe, Yunjeong
    Lee, Hee-Eun
    Jo, Ara
    Kim, Suhkmann
    Kim, Do-Hyung
    Cha, Hee-Jae
    Kang, Ho Young
    Choi, Yung Hyun
    Kim, Heui-Soo
    GENES & GENOMICS, 2017, 39 (07) : 779 - 791
12345