Nanopore sequencing of tomato mottle leaf distortion virus, a new bipartite begomovirus infecting tomato in Brazil

被引:6
|
作者
Martins, Thais P. [1 ,2 ]
Souza, Tadeu A. [2 ]
da Silva, Patricia S. [2 ]
Nakasu, Erich Y. T. [2 ]
Melo, Fernando L. [1 ]
Inoue-Nagata, Alice K. [2 ]
Nagata, Tatsuya [1 ]
机构
[1] Univ Brasilia, Dept Mol Biol, Brasilia, DF, Brazil
[2] Embrapa Vegetables, Lab Virol, Brasilia, DF, Brazil
基金
巴西圣保罗研究基金会;
关键词
D O I
10.1007/s00705-021-05220-w
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
During a survey in a tomato field in Luziania (Goias State, Brazil), a single plant with mottling, chlorotic spots, and leaf distortion was found. A new bipartite begomovirus sequence was identified using nanopore sequence technology and confirmed by Sanger sequencing. The highest nucleotide sequence identity match of the DNA-A component (2596 bases) was 81.64% with tomato golden leaf deformation virus (HM357456). Due to the current species demarcation criterion of 91% nucleotide sequence identity for DNA-A, we propose this virus to be a new member of the genus Begomovirus, named "tomato mottle leaf distortion virus".
引用
收藏
页码:3217 / 3220
页数:4
相关论文
共 50 条
  • [1] Nanopore sequencing of tomato mottle leaf distortion virus, a new bipartite begomovirus infecting tomato in Brazil
    Thais P. Martins
    Tadeu A. Souza
    Patricia S. da Silva
    Erich Y. T. Nakasu
    Fernando L. Melo
    Alice K. Inoue-Nagata
    Tatsuya Nagata
    [J]. Archives of Virology, 2021, 166 : 3217 - 3220
  • [2] Tomato yellow leaf distortion virus, a new bipartite begomovirus infecting tomato in Cuba
    Fiallo-Olive, E.
    Martinez-Zubiaur, Y.
    Rivera-Bustamante, R. F.
    [J]. PLANT PATHOLOGY, 2009, 58 (04) : 785 - 785
  • [3] Complete genome and pathogenicity of Tomato yellow leaf distortion virus, a bipartite begomovirus infecting tomato in Cuba
    E. Fiallo-Olivé
    C. Hernández-Zepeda
    D. Trejo-Saavedra
    J. Carrillo-Tripp
    R. F. Rivera-Bustamante
    Y. Martínez-Zubiaur
    [J]. European Journal of Plant Pathology, 2012, 134 : 13 - 21
  • [4] Complete genome and pathogenicity of Tomato yellow leaf distortion virus, a bipartite begomovirus infecting tomato in Cuba
    Fiallo-Olive, E.
    Hernandez-Zepeda, C.
    Trejo-Saavedra, D.
    Carrillo-Tripp, J.
    Rivera-Bustamante, R. F.
    Martinez-Zubiaur, Y.
    [J]. EUROPEAN JOURNAL OF PLANT PATHOLOGY, 2012, 134 (01) : 13 - 21
  • [5] Tomato chlorotic leaf distortion virus, a new bipartite begomovirus infecting Solanum lycopersicum and Capsicum chinense in Venezuela
    Karla Zambrano
    Francis Geraud-Pouey
    Doris Chirinos
    Gustavo Romay
    Edgloris Marys
    [J]. Archives of Virology, 2011, 156 : 2263 - 2266
  • [6] Tomato chlorotic leaf distortion virus, a new bipartite begomovirus infecting Solanum lycopersicum and Capsicum chinense in Venezuela
    Zambrano, Karla
    Geraud-Pouey, Francis
    Chirinos, Doris
    Romay, Gustavo
    Marys, Edgloris
    [J]. ARCHIVES OF VIROLOGY, 2011, 156 (12) : 2263 - 2266
  • [7] Tomato mottle wrinkle virus, a recombinant begomovirus infecting tomato in Argentina
    Vaghi Medina, C. G.
    Martin, D. P.
    Lopez Lambertini, P. M.
    [J]. ARCHIVES OF VIROLOGY, 2015, 160 (02) : 581 - 585
  • [8] Tomato mottle wrinkle virus, a recombinant begomovirus infecting tomato in Argentina
    C. G. Vaghi Medina
    D. P. Martin
    P. M. López Lambertini
    [J]. Archives of Virology, 2015, 160 : 581 - 585
  • [9] Tomato chlorotic mottle Guyane virus: a novel tomato-infecting bipartite begomovirus from French Guiana
    Jean-Michel Lett
    Alexandre De Bruyn
    Murielle Hoareau
    Alassane Ouattara
    Sohini Claverie
    Anne Dalmon
    Damien Laplace
    Pierre Lefeuvre
    Bruno Hostachy
    [J]. Archives of Virology, 2015, 160 : 2887 - 2890
  • [10] Tomato chlorotic mottle Guyane virus: a novel tomato-infecting bipartite begomovirus from French Guiana
    Lett, Jean-Michel
    De Bruyn, Alexandre
    Hoareau, Murielle
    Ouattara, Alassane
    Claverie, Sohini
    Dalmon, Anne
    Laplace, Damien
    Lefeuvre, Pierre
    Hostachy, Bruno
    [J]. ARCHIVES OF VIROLOGY, 2015, 160 (11) : 2887 - 2890