Draft genome sequence of Fusicladium effusum, cause of pecan scab

被引:15
|
作者
Bock, Clive H. [1 ]
Chen, Chunxian [1 ]
Yu, Fahong [2 ]
Stevenson, Katherine L. [3 ]
Wood, Bruce W. [1 ]
机构
[1] ARS, USDA, Southeastern Fruit & Tree Nut Res Lab, 21 Dunbar Rd, Byron, GA 31008 USA
[2] Univ Florida, Interdisciplinary Ctr Biotechnol Res, 2033 Mowry Rd, Gainesville, FL 32610 USA
[3] Univ Georgia, Dept Plant Pathol, 2360 Rainwater Rd, Tifton, GA 31793 USA
来源
关键词
Fusicladium effusum; Venturiacae; Fungal pathogen; Fungicide resistance; Genetic diversity; Pecan; Pecan scab; CLADOSPORIUM-CARYIGENUM; DIVERSITY;
D O I
10.1186/s40793-016-0161-y
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
Pecan scab, caused by the plant pathogenic fungus Fusicladium effusum, is the most destructive disease of pecan, an important specialty crop cultivated in several regions of the world. Only a few members of the family Venturiaceae (in which the pathogen resides) have been reported sequenced. We report the first draft genome sequence (40.6 Mb) of an isolate F. effusum collected from a pecan tree (cv. Desirable) in central Georgia, in the US. The genome sequence described will be a useful resource for research of the biology and ecology of the pathogen, coevolution with the pecan host, characterization of genes of interest, and development of markers for studies of genetic diversity, genotyping and phylogenetic analysis. The annotation of the genome is described and a phylogenetic analysis is presented.
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页数:7
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