The power and potential of genomics in weed biology and management

被引:57
|
作者
Ravet, Karl [1 ]
Patterson, Eric L. [1 ]
Kraehmer, Hansjoerg [3 ]
Hamouzova, Katerina [4 ]
Fan, Longjiang [5 ,6 ]
Jasieniuk, Marie [7 ]
Lawton-Rauh, Amy [8 ]
Malone, Jenna M. [9 ]
McElroy, J. Scott [10 ]
Merotto, Aldo, Jr. [11 ]
Westra, Philip [1 ]
Preston, Christopher [9 ]
Vila-Aiub, Martin M. [12 ]
Busi, Roberto [13 ]
Tranel, Patrick J. [14 ]
Reinhardt, Carl [15 ]
Saski, Christopher [16 ]
Beffa, Roland [3 ]
Neve, Paul [2 ]
Gaines, Todd A. [1 ]
机构
[1] Colorado State Univ, Dept Bioagr Sci & Pest Management, Ft Collins, CO 80523 USA
[2] Rothamsted Res, Biointeract & Crop Protect Dept, Harpenden AL5 2JQ, Herts, England
[3] Bayer AG, Ind Pk Hoechst, Frankfurt, Germany
[4] Czech Univ Life Sci Prague, Dept Agroecol & Biometeorol, Prague, Czech Republic
[5] Zhejiang Univ, Inst Crop Sci, Hangzhou, Zhejiang, Peoples R China
[6] Zhejiang Univ, Inst Bioinformat, Hangzhou, Zhejiang, Peoples R China
[7] Univ Calif Davis, Dept Plant Sci, Davis, CA 95616 USA
[8] Clemson Univ, Dept Genet & Biochem, 316 Biosyst Res Complex, Clemson, SC USA
[9] Univ Adelaide, Sch Agr Food & Wine, Glen Osmond, SA, Australia
[10] Auburn Univ, Dept Crop Soil & Environm Sci, Auburn, AL 36849 USA
[11] Univ Fed Rio Grande do Sul, Agr Sch, Dept Crop Sci, Porto Alegre, RS, Brazil
[12] Univ Buenos Aires, CONICET, IFEVA, Fac Agron,Dept Ecol, Buenos Aires, DF, Argentina
[13] Univ Western Australia, Australian Herbicide Resistance Initiat, Sch Agr & Environm, Crawley, WA, Australia
[14] Univ Illinois, Dept Crop Sci, Urbana, IL 61801 USA
[15] Univ Pretoria, Dept Plant & Soil Sci, Pretoria, South Africa
[16] Clemson Univ, Genom & Computat Biol Lab, Clemson, SC USA
基金
英国生物技术与生命科学研究理事会;
关键词
genomics; weed biology; weed management; weed evolution; herbicide resistance; weedy species; ACETOLACTATE SYNTHASE INHIBITORS; HERBICIDE RESISTANCE; ALOPECURUS-MYOSUROIDES; GLYPHOSATE RESISTANCE; MOLECULAR-BIOLOGY; NEXT-GENERATION; DRAFT GENOME; EVOLUTION; GRASS; CROP;
D O I
10.1002/ps.5048
中图分类号
S3 [农学(农艺学)];
学科分类号
0901 ;
摘要
There have been previous calls for, and efforts focused on, realizing the power and potential of weed genomics for better understanding of weeds. Sustained advances in genome sequencing and assembly technologies now make it possible for individual research groups to generate reference genomes for multiple weed species at reasonable costs. Here, we present the outcomes from several meetings, discussions, and workshops focused on establishing an International Weed Genomics Consortium (IWGC) for a coordinated international effort in weed genomics. We review the state of the art' in genomics and weed genomics, including technologies, applications, and on-going weed genome projects. We also report the outcomes from a workshop and a global survey of the weed science community to identify priority species, key biological questions, and weed management applications that can be addressed through greater availability of, and access to, genomic resources. Major focus areas include the evolution of herbicide resistance and weedy traits, the development of molecular diagnostics, and the identification of novel targets and approaches for weed management. There is increasing interest in, and need for, weed genomics, and the establishment of the IWGC will provide the necessary global platform for communication and coordination of weed genomics research. (c) 2018 Society of Chemical Industry
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页码:2216 / 2225
页数:10
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