Validation of reference genes for RT-qPCR analysis in Herbaspirillum seropedicae

被引:8
|
作者
Villarinho Pessoa, Daniella Duarte [1 ,2 ]
Vidal, Marcia Soares [2 ]
Baldani, Jose Ivo [2 ]
Simoes-Araujo, Jean Luiz [2 ]
机构
[1] Univ Fed Rio de Janeiro, CCS, Programa Posgrad Biotecnol Vegetal, Campus Ilha do Fundao,Av Carlos Chagas Filho 373, BR-21941590 Rio De Janeiro, RJ, Brazil
[2] EMBRAPA, Ctr Nacl Pesquisa Agrobiol, CNPAB, Lab Genet & Bioquim,Embrapa Agrobiol, BR 465,Km 7 S-N,Pavilhao Johanna Dobereiner, BR-23890000 Seropedica, RJ, Brazil
关键词
Expression stability; Housekeeping genes; qPCR internal control; Herbaspirillum seropedicae; Carbon source; MESSENGER-RNA; EXPRESSION; GLUCONACETOBACTER;
D O I
10.1016/j.mimet.2016.06.011
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
The RT-qPCR technique needs a validated set of reference genes for ensuring the consistency of the results from the gene expression. Expression stabilities for 9 genes from Herbaspirillum seropedicae, strain HRC54, grown with different carbon sources were calculated using geNorm and NormFinder, and the gene rpoA showed the best stability values. (C) 2016 Elsevier B.V. All rights reserved.
引用
收藏
页码:193 / 196
页数:4
相关论文
共 50 条
  • [1] Selection and validation of reference genes for RT-qPCR analysis in Desmodium styracifolium Merr
    Zhiqiang Wang
    Fangqin Yu
    Dingding Shi
    Ying Wang
    Feng Xu
    Shaohua Zeng
    [J]. 3 Biotech, 2021, 11
  • [2] Selection and validation of reference genes for RT-qPCR analysis in the pericarp of Litchi chinensis
    Li, F.
    Sun, J. H.
    Men, J. L.
    Li, H. L.
    Wang, G.
    Wang, S. J.
    Wang, J. B.
    [J]. BIOLOGIA PLANTARUM, 2022, 66 : 103 - 111
  • [3] Identification and validation of reference genes for RT-qPCR analysis in fetal rat pancreas
    Dai, Yongguo
    Kou, Hao
    Guo, Xiaoling
    Gong, Zheng
    Liu, Heze
    Liu, Yi
    Wang, Hui
    Guo, Yu
    [J]. REPRODUCTIVE TOXICOLOGY, 2021, 105 : 211 - 220
  • [4] Selection and validation of reference genes for RT-qPCR analysis in Desmodium styracifolium Merr
    Wang, Zhiqiang
    Yu, Fangqin
    Shi, Dingding
    Wang, Ying
    Xu, Feng
    Zeng, Shaohua
    [J]. 3 BIOTECH, 2021, 11 (09)
  • [5] Validation of Reliable Reference Genes for Accurate Normalization in RT-qPCR Analysis of Codonopsis pilosula
    Ling-ya Cao
    Xiao-xiao Li
    Dong Wang
    Hai-feng Sun
    Jian-ping Gao
    [J]. Chinese Herbal Medicines, 2017, 9 (03) : 226 - 235
  • [6] Selection and Validation of Reference Genes for RT-qPCR Analysis of the Ladybird Beetle Henosepilachna vigintioctomaculata
    Lu, Jing
    Chen, Shimin
    Guo, Mujuan
    Ye, Cuiyi
    Qiu, Baoli
    Wu, Jianhui
    Yang, Chunxiao
    Pan, Huipeng
    [J]. FRONTIERS IN PHYSIOLOGY, 2018, 9
  • [7] Selection and validation of reference genes for RT-qPCR analysis in potato under abiotic stress
    Xun Tang
    Ning Zhang
    Huaijun Si
    Alejandro Calderón-Urrea
    [J]. Plant Methods, 13
  • [8] Identification and validation of suitable reference genes for RT-qPCR analysis in mouse testis development
    Gong, Zu-Kang
    Wang, Shuang-Jie
    Huang, Yong-Qi
    Zhao, Rui-Qiang
    Zhu, Qi-Fang
    Lin, Wen-Zhen
    [J]. MOLECULAR GENETICS AND GENOMICS, 2014, 289 (06) : 1157 - 1169
  • [9] Selection and validation of reference genes for RT-qPCR analysis in potato under abiotic stress
    Tang, Xun
    Zhang, Ning
    Si, Huaijun
    Calderon-Urrea, Alejandro
    [J]. PLANT METHODS, 2017, 13
  • [10] Selection and Validation of Candidate Reference Genes for Gene Expression Analysis by RT-qPCR in Rubus
    Wu, Yaqiong
    Zhang, Chunhong
    Yang, Haiyan
    Lyu, Lianfei
    Li, Weilin
    Wu, Wenlong
    [J]. INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES, 2021, 22 (19)