Specific identification of certain probiotic Lactobacillus rhamnosus strains with PCR primers based on phage-related sequences

被引:52
|
作者
Brandt, K
Alatossava, T
机构
[1] Univ Oulu, Dept Biol, FIN-90014 Oulu, Finland
[2] Univ Oulu, Biotechnol Lab, REDEC Kajaani, FIN-88600 Sotkamo, Finland
关键词
lactic acid bacteria; Lactobacillus rhamnosus; probiotic bacteria; PCR identification; primer; phage sequence; prophage; lysogeny;
D O I
10.1016/S0168-1605(02)00419-1
中图分类号
TS2 [食品工业];
学科分类号
0832 ;
摘要
PCR primers derived from Lactobacillus rhamnosus phage Lc-Nu genome were used to screen the presence of phage-related sequences in Lb. rhamnosus strains. Several primer pairs derived from structural and replication gene regions of phage Lc-Nu amplified PCR products of expected sizes from bacterial strains revealing phage-related sequences in 10 of 11 Lb. rhamnosus strains. Strain-specific PCR primers for three probiotic Lb. rhamnosus strains were derived from these phage-related sequences for identification and detection purposes. Specificity of these primers was tested against 11 Lb. rhamnosus strains and over 40 other bacterial strains. (C) 2002 Elsevier Science B.V. All rights reserved.
引用
收藏
页码:189 / 196
页数:8
相关论文
共 50 条
  • [31] PCR-based sensitive and specific detection of Pectobacterium atrosepticum using primers based on Rhs family gene sequences
    Park, D. S.
    Shim, J. K.
    Kim, J. S.
    Kim, B. Y.
    Kang, M. J.
    Seol, Y. J.
    Hahn, J. H.
    Shrestha, R.
    Lim, C. K.
    Go, S. J.
    Kim, H. G.
    [J]. PLANT PATHOLOGY, 2006, 55 (05) : 625 - 629
  • [32] Serotype Specific Primers and Gel-Based RT-PCR Assays for 'Typing' African Horse Sickness Virus: Identification of Strains from Africa
    Maan, Narender S.
    Maan, Sushila
    Nomikou, Kyriaki
    Belaganahalli, Manjunatha N.
    Bachanek-Bankowska, Katarzyna
    Mertens, Peter P. C.
    [J]. PLOS ONE, 2011, 6 (10):
  • [33] Development of novel species-specific primers for the specific identification of Colletotrichum nymphaeae based on conventional PCR and LAMP techniques
    Karimi, Kaivan
    Arzanlou, Mandi
    Pertot, Ilaria
    [J]. EUROPEAN JOURNAL OF PLANT PATHOLOGY, 2020, 156 (02) : 463 - 475
  • [34] Rapid identification and detection of Lactobacillus sanfrancisco in sourdough by species-specific PCR with 16S rRNA-targeted primers
    Zapparoli, G
    Torriani, S
    [J]. SYSTEMATIC AND APPLIED MICROBIOLOGY, 1997, 20 (04) : 640 - 644
  • [35] Development of novel species-specific primers for the specific identification of Colletotrichum nymphaeae based on conventional PCR and LAMP techniques
    Kaivan Karimi
    Mahdi Arzanlou
    Ilaria Pertot
    [J]. European Journal of Plant Pathology, 2020, 156 : 463 - 475
  • [36] Design and evaluation of specific PCR primers for rapid and reliable identification of Staphylococcus xylosus strains isolated from dry fermented sausages
    Blaiotta, G
    Pennacchia, C
    Parente, E
    Villani, F
    [J]. SYSTEMATIC AND APPLIED MICROBIOLOGY, 2003, 26 (04) : 601 - 610
  • [37] Development of novel species-specific primers for species identification of the Lactobacillus casei group based on RAPD fingerprints
    Huang, Chien-Hsun
    Lee, Fwu-Ling
    [J]. JOURNAL OF THE SCIENCE OF FOOD AND AGRICULTURE, 2009, 89 (11) : 1831 - 1837
  • [38] Analysis of ribosomal DNA sequences of Polymyxa species and related fungi and the development of genus- and species-specific PCR primers
    Ward, E
    Adams, MJ
    [J]. MYCOLOGICAL RESEARCH, 1998, 102 : 965 - 974
  • [39] Sensitive and specific detection of Xanthomonas axonopodis pv. citri by PCR using pathovar specific primers based on hrpW gene sequences
    Park, DS
    Hyun, JW
    Park, YJ
    Kim, JS
    Kang, HW
    Hahn, JH
    Go, SJ
    [J]. MICROBIOLOGICAL RESEARCH, 2006, 161 (02) : 145 - 149
  • [40] Development of Prevotella intermedia-specific PCR primers based on the nucleotide sequences of a DNA probe Pig27
    Kim, Min Jung
    Hwang, Kyung Hwan
    Lee, Young-Seok
    Park, Jae-Yoon
    Kook, Joong-Ki
    [J]. JOURNAL OF MICROBIOLOGICAL METHODS, 2011, 84 (03) : 394 - 397