CREDO: a web-based tool for computational detection of conserved sequence motifs in noncoding sequences

被引：4
|
作者：
Hindemitt, T [1 ]
Mayer, KFX [1 ]
机构：
[1] GSF, MIPS, Inst Bioinformat, Res Ctr Environm & Hlth, D-85758 Neuherberg, Germany
来源：
BIOINFORMATICS | 2005年 / 21卷 / 23期
关键词：
D O I：
10.1093/bioinformatics/bti691
中图分类号：
Q5 [生物化学];
学科分类号：
071010 ; 081704 ;
摘要：
CREDO is a user-friendly, web-based tool that integrates the analysis and results of different algorithms widely used for the computational detection of conserved sequence motifs in noncoding sequences. It enables easy comparison of the individual results. CREDO offers intuitive interfaces for easy and rapid configuration of the applied algorithms and convenient views on the results in graphical and tabular formats.
引用
收藏
页码：4304 / 4306
页数：3
相关论文
共 50 条
  • [11] MotifCombinator: a web-based tool to search for combinations of cis-regulatory motifs
    Mamoru Kato
    Tatsuhiko Tsunoda
    BMC Bioinformatics, 8
  • [12] MotifCombinator: a web-based tool to search for combinations of cis-regulatory motifs
    Kato, Mamoru
    Tsunoda, Tatsuhiko
    BMC BIOINFORMATICS, 2007, 8 (1)
  • [13] A SIMPLE TOOL TO SEARCH FOR SEQUENCE MOTIFS THAT ARE CONSERVED IN BLAST OUTPUTS
    TATUSOV, RL
    KOONIN, EV
    COMPUTER APPLICATIONS IN THE BIOSCIENCES, 1994, 10 (04): : 457 - 459
  • [14] HaploSNPer: a web-based allele and SNP detection tool
    Tang, Jifeng
    Leunissen, Jack A. M.
    Voorrips, Roeland E.
    van der Linden, C. Gerard
    Vosman, Ben
    BMC GENETICS, 2008, 9 (1)
  • [15] HaploSNPer: a web-based allele and SNP detection tool
    Jifeng Tang
    Jack AM Leunissen
    Roeland E Voorrips
    C Gerard van der Linden
    Ben Vosman
    BMC Genetics, 9
  • [16] NEURONSESSIONS: A Web-Based Collaborative Tool to Create Brain Computational Models
    Porto, Ana
    Rodriguez, Guillermo
    Dorado, Julian
    Pazos, Alejandro
    ADVANCES IN COMPUTATIONAL BIOLOGY, 2010, 680 : 635 - 642
  • [17] BPPred: A Web-based computational tool for predicting biophysical parameters of proteins
    Geierhaas, Christian D.
    Nickson, Adrian A.
    Lindorff-Larsen, Kresten
    Clarke, Jane
    Vendruscolo, Michele
    PROTEIN SCIENCE, 2007, 16 (01) : 125 - 134
  • [18] Web-based computational chemistry
    A Entzian
    S Haase
    H Bögel
    Chemistry Central Journal, 3 (Suppl 1)
  • [19] SPiCE: a web-based tool for sequence-based protein classification and exploration
    van den Berg, Bastiaan A.
    Reinders, Marcel J. T.
    Roubos, Johannes A.
    de Ridder, Dick
    BMC BIOINFORMATICS, 2014, 15
  • [20] SPiCE: a web-based tool for sequence-based protein classification and exploration
    Bastiaan A van den Berg
    Marcel JT Reinders
    Johannes A Roubos
    Dick de Ridder
    BMC Bioinformatics, 15
12345