The complete chloroplast genome and phylogenetic analysis of Potentilla sischanensis Bunge ex Lehm

被引:0
|
作者
Guo, Yupeng [1 ]
Yao, Buqing [2 ,3 ]
Da, Wenting [1 ]
Du, Feichao [1 ]
Yuan, Mengran [1 ]
Li, Junqiao [1 ]
机构
[1] Qinghai Nationalities Univ, Coll Ecol Environm & Resources, Qinghai Prov Key Lab High Value Utilizat Characte, Xining 810007, Qinghai, Peoples R China
[2] Chinese Acad Sci, Key Lab Cold Reg Restorat Ecol, Xining, Qinghai, Peoples R China
[3] Chinese Acad Sci, Northwest Inst Plateau Biol, Key Lab Adaptat & Evolut Plateau Biota, Xining, Qinghai, Peoples R China
来源
MITOCHONDRIAL DNA PART B-RESOURCES | 2021年 / 6卷 / 11期
关键词
Potentilla sischanensis Bunge ex Lehm; chloroplast genome; phylogenetic analysis;
D O I
10.1080/23802359.2021.1991244
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
Potentilla sischanensis Bunge ex Lehm. is a widespread perennial herb in north China. The plant has little yellow flowers, and the petioles are white-tomentose and sparsely villous. To determine the chloroplast genome, total genomic DNA was extracted from fresh leaves and sequenced. The complete chloroplast genome was assembled and annotated. The chloroplast genome of this plant is a circular form with a length of 156,240 bp, including a large single-copy region (LSC, 85,748 bp), a small single-copy region (SSC, 18,566 bp), and two inverted repeats (IRs, 25,963 bp). A total of 132 genes were predicted, comprising 87 encoded proteins, 8 rRNAs and 37 tRNAs. The evolutionary history indicates that P. sischanensis was grouped within Potentilla and formed a clade with Potentilla chinensis and Potentilla stolonifera with a 100% bootstrap support value. The complete cp genome can serve as a reference for future studies on molecular biology, evolution, population genetics, taxonomy and resource protection.
引用
收藏
页码:3250 / 3252
页数:3
相关论文
共 50 条
  • [31] Complete Chloroplast Genome Sequence and Phylogenetic Analysis of Aster tataricus
    Shen, Xiaofeng
    Guo, Shuai
    Yin, Yu
    Zhang, Jingjing
    Yin, Xianmei
    Liang, Conglian
    Wang, Zhangwei
    Huang, Bingfeng
    Liu, Yanhong
    Xiao, Shuiming
    Zhu, Guangwei
    MOLECULES, 2018, 23 (10):
  • [32] The complete chloroplast genome of Cirsium shansiense and its phylogenetic analysis
    Xu, Jinshi
    Dang, Han
    Li, Huaizhu
    MITOCHONDRIAL DNA PART B-RESOURCES, 2020, 5 (02): : 1134 - 1135
  • [33] The complete chloroplast genome of Camellia gauchowensis and its phylogenetic analysis
    Zhang, Yuanlan
    Wang, Guibin
    MITOCHONDRIAL DNA PART B-RESOURCES, 2020, 5 (03): : 2299 - 2300
  • [34] Complete chloroplast genome of Syzygium glomeratum (Myrtaceae) and phylogenetic analysis
    Quang, Minh Trong
    Huynh, Thu-Thao Thi
    KOREAN JOURNAL OF PLANT TAXONOMY, 2024, 54 (04): : 316 - 322
  • [35] The complete chloroplast genome of Cirsium setosum and its phylogenetic analysis
    Xie, Binxin
    Jiang, Chunyan
    Zhu, Ziyan
    Li, Mingzhi
    Zhao, Yucheng
    MITOCHONDRIAL DNA PART B-RESOURCES, 2019, 4 (02): : 3756 - 3757
  • [36] The complete chloroplast genome of Enhalus acodoides and its phylogenetic analysis
    Lie, Tao
    Wu, Zhongjie
    Jia, Xuli
    Chen, Shiquan
    Cai, Zefu
    Shen, Jie
    Wang, Daoru
    MITOCHONDRIAL DNA PART B-RESOURCES, 2019, 4 (02): : 3667 - 3668
  • [37] Comparative and Phylogenetic Analysis of the Complete Chloroplast Genome of Santalum (Santalaceae)
    Liu, Xiaojin
    Xu, Daping
    Hong, Zhou
    Zhang, Ningnan
    Cui, Zhiyi
    FORESTS, 2021, 12 (10):
  • [38] The Complete Chloroplast Genome of Trichopus zeylanicus, And Phylogenetic Analysis with Dioscoreales
    Biju, Vadakkemukadiyil Chellappan
    Shidhi, P. R.
    Vijayan, Sheethal
    Rajan, Veena S.
    Sasi, Anu
    Janardhanan, Akhil
    Nair, Achuthsankar S.
    PLANT GENOME, 2019, 12 (03):
  • [39] Complete Chloroplast Genome Sequence and Phylogenetic Analysis of Paeonia ostii
    Guo, Shuai
    Guo, Lili
    Zhao, Wei
    Xu, Jiang
    Li, Yuying
    Zhang, Xiaoyan
    Shen, Xiaofeng
    Wu, Mingli
    Hou, Xiaogai
    MOLECULES, 2018, 23 (02):
  • [40] The complete chloroplast genome and phylogenetic analysis of Jacobaea maritima (Asteraceae)
    Zhang, Kai
    Gong, Shoufu
    MITOCHONDRIAL DNA PART B-RESOURCES, 2023, 8 (07): : 771 - 776