Expression and characterization of a new esterase with GCSAG motif from a permafrost metagenomic library

被引:31
|
作者
Petrovskaya, Lada E. [1 ]
Novototskaya-Vlasova, Ksenia A. [2 ]
Spirina, Elena V. [2 ]
Durdenko, Ekaterina V. [2 ]
Lomakina, Galina Yu [3 ]
Zavialova, Maria G. [4 ]
Nikolaev, Evgeny N. [4 ,5 ]
Rivkina, Elizaveta M. [2 ]
机构
[1] Russian Acad Sci, Shemyakin & Ovchinnikov Inst Bioorgan Chem, Ul Miklukho Maklaya 16-10, Moscow 117997, Russia
[2] Russian Acad Sci, Inst Physicochem & Biol Problems Soil Sci, Inst Skaya Str 2, Pushchino 142290, Moscow Region, Russia
[3] Moscow MV Lomonosov State Univ, Dept Chem, Leninskiye Gory 1-3, Moscow 119991, Russia
[4] Russian Acad Med Sci, Orekhovich Inst Biomed Chem, Ul Pogodinskaya 10, Moscow 119121, Russia
[5] Russian Acad Sci, Inst Energy Problems Chem Phys, Leninskij Pr 38 K2, Moscow 119334, Russia
基金
俄罗斯科学基金会;
关键词
permafrost; metagenome; microcosm; esterase; HSL family; GCSAG motif; HORMONE-SENSITIVE LIPASE; PSYCHROBACTER-ARCTICUS; 273-4; COLD-ACTIVE ESTERASE; SIBERIAN PERMAFROST; PROTEOMIC ANALYSIS; MICROBIAL ECOLOGY; LOW-TEMPERATURE; GENE CLONING; ADAPTATION; PURIFICATION;
D O I
10.1093/femsec/fiw046
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
As a result of construction and screening of a metagenomic library prepared from a permafrost-derived microcosm, we have isolated a novel gene coding for a putative lipolytic enzyme that belongs to the hormone-sensitive lipase family. It encodes a polypeptide of 343 amino acid residues whose amino acid sequence displays maximum likelihood with uncharacterized proteins from Sphingomonas species. A putative catalytic serine residue of PMGL2 resides in a new variant of a recently discovered GTSAG sequence in which a Thr residue is replaced by a Cys residue (GCSAG). The recombinant PMGL2 was produced in Escherichia coli cells and purified by Ni-affinity chromatography. The resulting protein preferably utilizes short-chain p-nitrophenyl esters (C4 and C8) and therefore is an esterase. It possesses maximum activity at 45. C in slightly alkaline conditions and has limited thermostability at higher temperatures. Activity of PMGL2 is stimulated in the presence of 0.25-1.5 M NaCl indicating the good salt tolerance of the new enzyme. Mass spectrometric analysis demonstrated that N-terminal methionine in PMGL2 is processed and cysteine residues do not form a disulfide bond. The results of the study demonstrate the significance of the permafrost environment as a unique genetic reservoir and its potential for metagenomic exploration.
引用
收藏
页数:11
相关论文
共 50 条
  • [21] Isolation and characterization of a novel organic solvent-tolerant and halotolerant esterase from a soil metagenomic library
    Wang, Sidi
    Wang, Kui
    Li, Liang
    Liu, Yuhuan
    JOURNAL OF MOLECULAR CATALYSIS B-ENZYMATIC, 2013, 95 : 1 - 8
  • [22] Biochemical characterization of a family IV esterase with R-form enantioselectivity from a compost metagenomic library
    Park, Jong Eun
    Jeong, Geum Seok
    Lee, Hyun Woo
    Kim, Hoon
    APPLIED BIOLOGICAL CHEMISTRY, 2021, 64 (01)
  • [23] Biochemical characterization of a family IV esterase with R-form enantioselectivity from a compost metagenomic library
    Jong Eun Park
    Geum Seok Jeong
    Hyun Woo Lee
    Hoon Kim
    Applied Biological Chemistry, 2021, 64
  • [24] Screening and identification of a novel esterase EstPE from a metagenomic DNA library
    So-Youn Park
    Hyun-Jae Shin
    Geun-Joong Kim
    The Journal of Microbiology, 2011, 49 : 7 - 14
  • [25] A novel feruloyl esterase from a soil metagenomic library with tannase activity
    Yao, Jian
    Chen, Qing Long
    Shen, Ai Xi
    Cao, Wen
    Liu, Yu Huan
    JOURNAL OF MOLECULAR CATALYSIS B-ENZYMATIC, 2013, 95 : 55 - 61
  • [26] Screening and Identification of a Novel Esterase EstPE from a Metagenomic DNA Library
    Park, So-Youn
    Shin, Hyun-Jae
    Kim, Geun-Joong
    JOURNAL OF MICROBIOLOGY, 2011, 49 (01) : 7 - 14
  • [27] Expression and characterization of a thermostable penicillin G acylase from an environmental metagenomic library
    Zhang, Qian
    Xu, Hui
    Zhao, Jing
    Zeng, Runying
    BIOTECHNOLOGY LETTERS, 2014, 36 (03) : 617 - 625
  • [28] Expression and characterization in E. coli of a neutral invertase from a metagenomic library
    Li-Qin Du
    Hao Pang
    Yuan-Yuan Hu
    Yu-Tuo Wei
    Ri-Bo Huang
    World Journal of Microbiology and Biotechnology, 2010, 26 : 419 - 428
  • [29] Expression and characterization of alkaline protease from the metagenomic library of tannery activated sludge
    Devi, Selvaraju Gayathri
    Fathima, Anwar Aliya
    Sanitha, Mary
    Iyappan, Sellamuthu
    Curtis, Wayne R.
    Ramya, Mohandass
    JOURNAL OF BIOSCIENCE AND BIOENGINEERING, 2016, 122 (06) : 694 - 700
  • [30] Expression and characterization of a thermostable penicillin G acylase from an environmental metagenomic library
    Qian Zhang
    Hui Xu
    Jing Zhao
    Runying Zeng
    Biotechnology Letters, 2014, 36 : 617 - 625