A Survey of Genetic Variation and Genome Evolution within the Invasive Fallopia Complex

被引:16
|
作者
Bzdega, Katarzyna [1 ]
Janlak, Agnieszka [2 ]
Kslazczyk, Tomasz [3 ]
Lewandowska, Agata [1 ]
Gancarek, Malgorzata [1 ]
Sliwinska, Elwira [4 ]
Tokarska-Guzik, Barbara [1 ]
机构
[1] Univ Silesia, Dept Bot & Nat Protect, Katowice, Poland
[2] Univ Silesia, Dept Genet, Katowice, Poland
[3] Polish Acad Sci, Inst Plant Genet, Dept Environm Stress Biol, Poznan, Poland
[4] UTP Univ Sci & Technol, Dept Plant Genet Physiol & Biotechnol, Bydgoszcz, Poland
来源
PLOS ONE | 2016年 / 11卷 / 08期
关键词
RIBOSOMAL-RNA GENES; POLYMORPHISM AFLP MARKERS; SEX-CHROMOSOME SYSTEM; HOUTT. RONSE DECR; POLYGONACEAE COMPLEX; SPP; POLYGONACEAE; MULTIPLE SOURCES; BRASSICA-NAPUS; CENTRAL-EUROPE; DNA-SEQUENCES;
D O I
10.1371/journal.pone.0161854
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
The knotweed taxa Fallopia japonica, F. sachalinensis and their interspecific hybrid F. x bohemica are some of the most aggressive invaders in Europe and North America and they are serious threats to native biodiversity. At the same time, they constitute a unique model system for the creation of hybrids and studies of the initiation of evolutionary processes. In the presented study, we focused on (i) examining genetic diversity in selected populations of three Fallopia taxa in the invaded (Poland) and native ranges (Japan), (ii) establishing genome size and ploidy levels and (iii) identifying ribosomal DNA (rDNA)-bearing chromosomes in all of the taxa from the invaded range. We found that the genetic diversity within particular taxa was generally low regardless of their geographical origin. A higher level of clonality was observed for the Polish populations compared to the Japanese populations. Our study suggests that the co-occurrence of F. sachalinensis together with the other two taxa in the same stand may be the source of the higher genetic variation within the F. x bohemica hybrid. Some shift towards the contribution of F. japonica alleles was also observed for selected F. x bohemica individuals, which indicates the possibility of producing more advanced generations of F. x bohemica hybrids. All of the F. sachalinensis individuals were hexaploid (2n = 6x = 66; 2C = 6.01 pg), while those of F. japonica were mostly octoploid (2n = 8x = 88; 2C = 8.87 pg) and all of the F. x bohemica plants except one were hexaploid (2n = 6x = 66; 2C = 6.46 pg). Within the chromosome complement of F. japonica, F. sachalinensis and F. x bohemica, the physical mapping of the rDNA loci provided markers for 16, 13 and 10 chromosomes, respectively. In F. x bohemica, a loss of some of rDNA loci was observed, which indicates the occurrence of genome changes in the hybrid.
引用
收藏
页数:23
相关论文
共 50 条
  • [11] Variation of growth and functional traits of invasive knotweeds (Fallopia spp.) in Belgium
    Herpigny, Basile
    Dassonville, Nicolas
    Ghysels, Philippe
    Mahy, Gregory
    Meerts, Pierre
    PLANT ECOLOGY, 2012, 213 (03) : 419 - 430
  • [12] A survey of the genome-wide genetic variation of Hibiscus hamabo (Malvaceae)
    Hwang, Geonha
    Jung, Ui-Chan
    Kim, Sang -Tae
    KOREAN JOURNAL OF PLANT TAXONOMY, 2023, 53 (02): : 148 - 156
  • [13] Genome size variation and evolution during invasive range expansion in an introduced plant
    Cang, F. Alice
    Welles, Shana R.
    Wong, Jenny
    Ziaee, Maia
    Dlugosch, Katrina M.
    EVOLUTIONARY APPLICATIONS, 2024, 17 (01):
  • [14] Genome partitioning of genetic variation for complex traits using common SNPs
    Yang, Jian
    Manolio, Teri A.
    Pasquale, Louis R.
    Boerwinkle, Eric
    Caporaso, Neil
    Cunningham, Julie M.
    de Andrade, Mariza
    Feenstra, Bjarke
    Feingold, Eleanor
    Hayes, M. Geoffrey
    Hill, William G.
    Landi, Maria Teresa
    Alonso, Alvaro
    Lettre, Guillaume
    Lin, Peng
    Ling, Hua
    Lowe, William
    Mathias, Rasika A.
    Melbye, Mads
    Pugh, Elizabeth
    Cornelis, Marilyn C.
    Weir, Bruce S.
    Goddard, Michael E.
    Visscher, Peter M.
    NATURE GENETICS, 2011, 43 (06) : 519 - U44
  • [15] Genome partitioning of genetic variation for complex traits using common SNPs
    Jian Yang
    Teri A Manolio
    Louis R Pasquale
    Eric Boerwinkle
    Neil Caporaso
    Julie M Cunningham
    Mariza de Andrade
    Bjarke Feenstra
    Eleanor Feingold
    M Geoffrey Hayes
    William G Hill
    Maria Teresa Landi
    Alvaro Alonso
    Guillaume Lettre
    Peng Lin
    Hua Ling
    William Lowe
    Rasika A Mathias
    Mads Melbye
    Elizabeth Pugh
    Marilyn C Cornelis
    Bruce S Weir
    Michael E Goddard
    Peter M Visscher
    Nature Genetics, 2011, 43 : 519 - 525
  • [16] How genome size variation is linked with evolution within Chenopodium sensu lato
    Mandak, Bohumil
    Krak, Karol
    Vit, Petr
    Pavlikova, Zuzana
    Lomonosova, Maria N.
    Habibi, Farzaneh
    Wang, Lei
    Jellen, Eric N.
    Douda, Jan
    PERSPECTIVES IN PLANT ECOLOGY EVOLUTION AND SYSTEMATICS, 2016, 23 : 18 - 32
  • [17] Variation in nuclear genome size within the Eisenia nordenskioldi complex (Lumbricidae, Annelida)
    Shekhovtsov, S., V
    Efremov, Ya R.
    Poluboyarova, T., V
    Peltek, S. E.
    VAVILOVSKII ZHURNAL GENETIKI I SELEKTSII, 2021, 25 (06): : 647 - 651
  • [18] Whole genome resequencing reveal patterns of genetic variation within Colletotrichum acutatum species complex from rubber trees in China
    Liu, Xianbao
    Li, Boxun
    Cai, Jimiao
    Shi, Tao
    Yang, Yang
    Feng, Yanli
    Huang, Guixiu
    FUNGAL GENETICS AND BIOLOGY, 2023, 167
  • [19] A Genome Wide Survey of SNP Variation Reveals the Genetic Structure of Sheep Breeds
    Kijas, James W.
    Townley, David
    Dalrymple, Brian P.
    Heaton, Michael P.
    Maddox, Jillian F.
    McGrath, Annette
    Wilson, Peter
    Ingersoll, Roxann G.
    McCulloch, Russell
    McWilliam, Sean
    Tang, Dave
    McEwan, John
    Cockett, Noelle
    Oddy, V. Hutton
    Nicholas, Frank W.
    Raadsma, Herman
    PLOS ONE, 2009, 4 (03):
  • [20] The potential role of polyploidy and hybridisation in the further evolution of the highly invasive Fallopia taxa in Europe
    Bailey, John P.
    Bimova, Katerina
    Mandak, Bohumil
    ECOLOGICAL RESEARCH, 2007, 22 (06) : 920 - 928